RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 RAB32Q13637 225 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 DEFB114Q30KQ6 69 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 ETFRF1Q6IPR1 90 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 TOMM20LQ6UXN7 152 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 RAB40CQ96S21 281 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 UFC1Q9Y3C8 167 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
RNF43-206ENST00000582293 ALG5Q9Y673 324 aa12.4□□□□□ -0.42
RNF43-206ENST00000582293 LY86O95711 162 aa12.39□□□□□ -0.43
RNF43-206ENST00000582293 TAS2R30P59541 319 aa12.39□□□□□ -0.43
RNF43-206ENST00000582293 RAB11AP62491 216 aa12.39□□□□□ -0.43
RNF43-206ENST00000582293 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
RNF43-206ENST00000582293 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
RNF43-206ENST00000582293 ACY3Q96HD9 319 aa12.39□□□□□ -0.43
RNF43-206ENST00000582293 C20orf24Q9BUV8 137 aa12.39□□□□□ -0.43
RNF43-206ENST00000582293 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
RNF43-206ENST00000582293 PAIP2BQ9ULR5 123 aaKnown RBP12.39□□□□□ -0.43
RNF43-206ENST00000582293 ZNF256Q9Y2P7 627 aaPredicted RBP12.39□□□□□ -0.43
RNF43-206ENST00000582293 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
RNF43-206ENST00000582293 PUS1Q9Y606 427 aaKnown RBP eCLIP12.39□□□□□ -0.43
RNF43-206ENST00000582293 IGKV1OR2-108A0A075B7D4 117 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 K7EMT4 169 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 TSC22D2O75157 780 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 OR10J1P30954 320 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 ARL16Q0P5N6 197 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 OXA1LQ15070 435 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 OR1S2Q8NGQ3 325 aa12.38□□□□□ -0.43
RNF43-206ENST00000582293 MRPL27Q9P0M9 148 aaKnown RBP12.38□□□□□ -0.43
RNF43-206ENST00000582293 TRAV30A0A087WSZ9 112 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 YIF1AO95070 293 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 SCAF4O95104 1147 aaKnown RBP12.37□□□□□ -0.43
RNF43-206ENST00000582293 METTL15P1P0C7V9 234 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 GP9P14770 177 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 RPP30P78346 268 aaKnown RBP12.37□□□□□ -0.43
RNF43-206ENST00000582293 RGS21Q2M5E4 152 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 BTNL8Q6UX41 500 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 ACOT7LQ6ZUV0 252 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 MARC2Q969Z3 335 aa12.37□□□□□ -0.43
RNF43-206ENST00000582293 ZNF785A8K8V0 405 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 H0YIZ8 118 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 SSNA1O43805 119 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 APOHP02749 345 aaPredicted RBP12.36□□□□□ -0.43
RNF43-206ENST00000582293 YPEL3P61236 119 aaPredicted RBP12.36□□□□□ -0.43
RNF43-206ENST00000582293 TMEM61Q8N0U2 210 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 THAP8Q8NA92 274 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 OR2K2Q8NGT1 345 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 NMES1Q9C002 83 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 TECRQ9NZ01 308 aaKnown RBP12.36□□□□□ -0.43
RNF43-206ENST00000582293 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
RNF43-206ENST00000582293 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
RNF43-206ENST00000582293 IGHV3-49A0A0A0MS15 119 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 CXCL3P19876 107 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 S100A10P60903 97 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 ZNF90Q03938 601 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 OR8G2PQ6IF36 304 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 Q8N1Y9 231 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
RNF43-206ENST00000582293 ZMAT5Q9UDW3 170 aaKnown RBP12.35□□□□□ -0.43
RNF43-206ENST00000582293 FAM24AA6NFZ4 105 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 CHEK1O14757 476 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 DEDDO75618 318 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 TOMM40O96008 361 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 PSG1P11464 419 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 USF2Q15853 346 aaPredicted RBP12.34□□□□□ -0.43
RNF43-206ENST00000582293 LILRB2Q8N423 598 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 MRAPQ8TCY5 172 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 OR5AC2Q9NZP5 309 aa12.34□□□□□ -0.43
RNF43-206ENST00000582293 DNAH9Q9NYC9 4486 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 IGHV3OR16-13A0A075B7E8 117 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 TRAV14DV4A0A0A6YYC5 116 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 IGHV3-74A0A0B4J1X5 117 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 IGSF23A1L1A6 192 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 L7N2F9 121 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 VAMP2P63027 116 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 LCN12Q6JVE5 192 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 TMEM182Q6ZP80 229 aaPredicted RBP12.33□□□□□ -0.44
RNF43-206ENST00000582293 OR11H7Q8NGC8 314 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 RNF2Q99496 336 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
RNF43-206ENST00000582293 LYRM2Q9NU23 88 aaPredicted RBP12.33□□□□□ -0.44
RNF43-206ENST00000582293 SORL1Q92673 2214 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 CRYBB3P26998 211 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 RRAS2P62070 204 aaPredicted RBP12.32□□□□□ -0.44
RNF43-206ENST00000582293 DLK1P80370 383 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 FCN2Q15485 313 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 LRRC37A5PQ49AS3 106 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 FAM90A2PQ658T7 463 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 TMEM252Q8N6L7 170 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 Q8WTZ3 238 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 ST8SIA2Q92186 375 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 TRGV9Q99603 122 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 GINS3Q9BRX5 216 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 RNF126Q9BV68 326 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
RNF43-206ENST00000582293 U3KQE9 123 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms