RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 CLN5O75503 358 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 MBPP02686 304 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 SUB1P53999 127 aaKnown RBP eCLIP7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 CD81P60033 236 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 SRPXP78539 464 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 OR2F1Q13607 317 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 IAH1Q2TAA2 248 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 SPSB3Q6PJ21 355 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 FAM24BQ8N5W8 94 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 ZBTB8BQ8NAP8 495 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 ZNF431Q8TF32 576 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 TXN2Q99757 166 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 NEURL2Q9BR09 285 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 HIPK2Q9H2X6 1198 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 UFC1Q9Y3C8 167 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 TMED3Q9Y3Q3 217 aa7.33□□□□□ -1.24
GTF3C1-212ENST00000570129 DUXBA0A1W2PPF3 345 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 FAM25EA8MYX2 175 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 SYNGR2O43760 224 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 SSSCA1O60232 199 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 DFFBO76075 338 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 SCGB1D2O95969 90 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 IFNA4P05014 189 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 SLC25A6P12236 298 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 GATA2P23769 480 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 OR10J1P30954 320 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 NPBWR1P48145 328 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 USF2Q15853 346 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 SPANXN5Q5MJ07 72 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 FAM90A2PQ658T7 463 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 LINC00299Q6ZSB3 139 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 SLC16A13Q7RTY0 426 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 C12orf45Q8N5I9 185 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 TMEM116Q8NCL8 245 aa7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 RCL1Q9Y2P8 373 aaKnown RBP7.32□□□□□ -1.24
GTF3C1-212ENST00000570129 TRAV14DV4A0A0A6YYC5 116 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 PMS2P5A8MQ11 134 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 OR11H12B2RN74 326 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 K7EMT4 169 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 HAGHQ16775 308 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 LCN12Q6JVE5 192 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 ZNF600Q6ZNG1 722 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 APRG1Q8IVJ8 170 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 COQ8AQ8NI60 647 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 RNASEH2CQ8TDP1 164 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 WDR12Q9GZL7 423 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 C11orf1Q9H5F2 150 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 PALMDQ9NP74 551 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 DAZ1Q9NQZ3 744 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 TECRQ9NZ01 308 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 U3KQ87 197 aa7.31□□□□□ -1.24
GTF3C1-212ENST00000570129 METTL15P1P0C7V9 234 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 PRB4P10163 310 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 PSG1P11464 419 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 NKX2-1P43699 371 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 ELLP55199 621 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 DEFB1P60022 68 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 RRAS2P62070 204 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 IL15RAQ13261 267 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 ODF3L2Q3SX64 289 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 OR8G2PQ6IF36 304 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 MZT2BQ6NZ67 158 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 LINC00322Q6ZN03 302 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 TCF24Q7RTU0 167 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 OR51G1Q8NGK1 321 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 ATP6V0BQ99437 205 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 FAM110AQ9BQ89 295 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 PSENENQ9NZ42 101 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 U3KQE9 123 aa7.3□□□□□ -1.24
GTF3C1-212ENST00000570129 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 C5orf51A6NDU8 294 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 FAM24AA6NFZ4 105 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 INMT-MINDY4F8WBC2 141 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 K7EPK0 472 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 IFNA21P01568 189 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 IL5P05113 134 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 RELQ04864 619 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 RBPMS2Q6ZRY4 209 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 OR2K2Q8NGT1 345 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 VSIRQ9H7M9 311 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 TUBA4BQ9H853 241 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 SRD5A3Q9H8P0 318 aa7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 ZMAT5Q9UDW3 170 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 LSM5Q9Y4Y9 91 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-212ENST00000570129 RPS10-NUDT3A0A1W2PQS6 291 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 FAM90A26D6RGX4 464 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 H0YIZ8 118 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 CORTO00230 105 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 TSPAN4O14817 238 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 IL4P05112 153 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 RD3LP0DJH9 198 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 SLC25A4P12235 298 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 CRYBB3P26998 211 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 GPX4P36969 197 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 ACOT7LQ6ZUV0 252 aa7.28□□□□□ -1.24
GTF3C1-212ENST00000570129 OR1S2Q8NGQ3 325 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms