RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 OR5AU1Q8NGC0 362 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 AURKAIP1Q9NWT8 199 aaPredicted RBP14.42□□□□□ -0.1
SMPD3-211ENST00000568373 ELOA3CA0A087WX78 387 aaPredicted RBP14.42□□□□□ -0.1
SMPD3-211ENST00000568373 IGHV3-21A0A0B4J1V1 117 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 UBE2CO00762 179 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 RPL35P42766 123 aaKnown RBP14.42□□□□□ -0.1
SMPD3-211ENST00000568373 C5orf64Q2M2E5 130 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 PYGO2Q9BRQ0 406 aa14.42□□□□□ -0.1
SMPD3-211ENST00000568373 MYO18BQ8IUG5 2567 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 DOPEY1Q5JWR5 2465 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 FAM208BQ5VWN6 2430 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 A0A1W2PRE2 83 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 TGOLN2O43493 480 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 TOX4O94842 621 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 UBE2L3P68036 154 aaKnown RBP14.41□□□□□ -0.1
SMPD3-211ENST00000568373 ELOVL1Q9BW60 279 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 WNT10AQ9GZT5 417 aa14.41□□□□□ -0.1
SMPD3-211ENST00000568373 GGTLC3B5MD39 225 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 I3L2K1 104 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 GOSR1O95249 250 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 IGHV4-39P01824 125 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 TRGC2P03986 189 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 FXYD3Q14802 87 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 C9JCJ5 164 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 AP4M1O00189 453 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 LINC00305Q7Z4B0 112 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 OCC1Q8TAD7 63 aa14.4□□□□□ -0.1
SMPD3-211ENST00000568373 PPP1R2P9O14990 202 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 SRP14P37108 136 aaKnown RBP14.39□□□□□ -0.11
SMPD3-211ENST00000568373 FABP9Q0Z7S8 132 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 EBI3Q14213 229 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 LINC00518Q8N0U6 118 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 Q8N6K4 173 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 SFRP2Q96HF1 295 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 TBX15Q96SF7 602 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 PAXXQ9BUH6 204 aa14.39□□□□□ -0.11
SMPD3-211ENST00000568373 TBL2Q9Y4P3 447 aaKnown RBP14.39□□□□□ -0.11
SMPD3-211ENST00000568373 ORM2P19652 201 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 CRYBB3P26998 211 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 PDLIM4P50479 330 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 UBE2E1P51965 193 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 OR1B1Q8NGR6 318 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 LY96Q9Y6Y9 160 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 MDFIC2A0A1B0GVS7 189 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 PYYP10082 97 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 SUMO1P63165 101 aaKnown RBP14.38□□□□□ -0.11
SMPD3-211ENST00000568373 OR1L6Q8NGR2 347 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 PERPQ96FX8 193 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 FAM103A1Q9BTL3 118 aaKnown RBP14.38□□□□□ -0.11
SMPD3-211ENST00000568373 OR51M1Q9H341 326 aa14.38□□□□□ -0.11
SMPD3-211ENST00000568373 USP9XQ93008 2570 aaPredicted RBP14.38□□□□□ -0.11
SMPD3-211ENST00000568373 UTP20O75691 2785 aaKnown RBP14.37□□□□□ -0.11
SMPD3-211ENST00000568373 IGLC1P0CG04 106 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 ZNF562Q6V9R5 426 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 GSX1Q9H4S2 264 aaPredicted RBP14.37□□□□□ -0.11
SMPD3-211ENST00000568373 SRD5A3Q9H8P0 318 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 NCBP2LA6PVI3 153 aaKnown RBP14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BKO60814 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 GGCTO75223 188 aaKnown RBP14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BJP06899 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BOP23527 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BBP33778 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BDP58876 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 PLP1P60201 277 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BCP62807 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 CTAG1AP78358 180 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST2H2BEQ16778 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.37□□□□□ -0.11
SMPD3-211ENST00000568373 TEX38Q6PEX7 206 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 KCNIP4Q6PIL6 250 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BHQ93079 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BNQ99877 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 HIST1H2BMQ99879 126 aa14.37□□□□□ -0.11
SMPD3-211ENST00000568373 A0A1W2PPQ1 181 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 HELTA6NFD8 242 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 K7EIM0 57 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 K7EN84 100 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 HYPMO75409 117 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 HNF1AP20823 631 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 STXBP6Q8NFX7 210 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 FXYD5Q96DB9 178 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 IMMP2LQ96T52 175 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 CCL19Q99731 98 aa14.36□□□□□ -0.11
SMPD3-211ENST00000568373 PHOX2AO14813 284 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 TMEM11P17152 192 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 CX3CL1P78423 397 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 ARPC1AQ92747 370 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 AJUBAQ96IF1 538 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 PPP5D1E7EU14 171 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 GNG4P50150 75 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 CLEC12BQ2HXU8 276 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 CENPWQ5EE01 88 aa14.35□□□□□ -0.11
SMPD3-211ENST00000568373 PSG1P11464 419 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 FRZBQ92765 325 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 RASL11BQ9BPW5 248 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 LPAR2Q9HBW0 351 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
SMPD3-211ENST00000568373 SVEP1Q4LDE5 3571 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 NPIPB5A8MRT5 1133 aa14.34□□□□□ -0.11
SMPD3-211ENST00000568373 FAM106CPP0CH98 169 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms