RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
LINC00554-201ENST00000564841 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
LINC00554-201ENST00000564841 PAX2Q02962 417 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 MBD6Q96DN6 1003 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
LINC00554-201ENST00000564841 TCF19Q9Y242 345 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 ZZEF1O43149 2961 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 J3QW42 95 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 GPR183P32249 361 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 TMEM30CPA0ZSE6 113 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 G3V4G9 280 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 TM4SF5O14894 197 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 SS18L1O75177 396 aaPredicted RBP13.27□□□□□ -0.28
LINC00554-201ENST00000564841 EDDM3AQ14507 147 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 LEAP2Q969E1 77 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 MPC1Q9Y5U8 109 aa13.27□□□□□ -0.28
LINC00554-201ENST00000564841 KALRNO60229 2985 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 LGALS7P47929 136 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 ERVK11-1P61568 191 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 C1orf229Q6ZS94 237 aaPredicted RBP13.27□□□□□ -0.29
LINC00554-201ENST00000564841 C2orf91Q6ZV80 131 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 PKIBQ9C010 78 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 DUSP13Q9UII6 198 aa13.27□□□□□ -0.29
LINC00554-201ENST00000564841 IGKV3D-15A0A087WSY6 115 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20EP86478 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20CP86479 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20DP86480 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20BP86481 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR20AP86496 221 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 COX19Q49B96 90 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 BHLHA15Q7RTS1 189 aaPredicted RBP13.26□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PYYP10082 97 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 DUTP33316 252 aaKnown RBP13.26□□□□□ -0.29
LINC00554-201ENST00000564841 GNG5P63218 68 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
LINC00554-201ENST00000564841 SLC25A40Q8TBP6 338 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 OBP2BQ9NPH6 170 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM140Q9NV12 185 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
LINC00554-201ENST00000564841 PRR33A8MZF0 331 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 PKDREJQ9NTG1 2253 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 IGHV3-48P01763 117 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 MPV17P39210 176 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 FABP6P51161 128 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 OR9G1Q8NH87 305 aa13.25□□□□□ -0.29
LINC00554-201ENST00000564841 GPR12P47775 334 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 ZNF146Q15072 292 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 UFSP1Q6NVU6 142 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 NANOS1Q8WY41 292 aaKnown RBP13.24□□□□□ -0.29
LINC00554-201ENST00000564841 COL6A6A6NMZ7 2263 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 TACC2O95359 2948 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 PTPRQQ9UMZ3 2332 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 OOEPA6NGQ2 149 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 K7EM74 188 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 NCR2O95944 276 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 HTR1DP28221 377 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
LINC00554-201ENST00000564841 ARF6P62330 175 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 HIST1H1AQ02539 215 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 VWA1Q6PCB0 445 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 RTL8AQ9BWD3 113 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM167BQ9NRX6 74 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 CRXO43186 299 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 PLAUP00749 431 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 ZNF134P52741 427 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 LINC00322Q6ZN03 302 aaPredicted RBP13.23□□□□□ -0.29
LINC00554-201ENST00000564841 OR4S2Q8NH73 311 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 IDI2-AS1Q9NZ38 188 aa13.23□□□□□ -0.29
LINC00554-201ENST00000564841 FBLL1A6NHQ2 334 aaKnown RBP13.22□□□□□ -0.29
LINC00554-201ENST00000564841 RAB31Q13636 194 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 WIPF2Q8TF74 440 aaPredicted RBP13.22□□□□□ -0.29
LINC00554-201ENST00000564841 PGLYRP4Q96LB8 373 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 PTPRBP23467 1997 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 PPIAL4GP0DN37 164 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 ASCL5Q7RTU5 278 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 WFDC12Q8WWY7 111 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 GNG12Q9UBI6 72 aa13.22□□□□□ -0.29
LINC00554-201ENST00000564841 AMMECR1Q9Y4X0 333 aaPredicted RBP13.22□□□□□ -0.29
LINC00554-201ENST00000564841 TRAV17A0A0B4J275 112 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.29
LINC00554-201ENST00000564841 SAMD13Q5VXD3 122 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 OR2V2Q96R30 315 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 OR2J3O76001 311 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 FOXC1Q12948 553 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 Q71RC1 249 aaPredicted RBP13.21□□□□□ -0.29
LINC00554-201ENST00000564841 PERPQ96FX8 193 aa13.21□□□□□ -0.29
LINC00554-201ENST00000564841 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms