RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 S100A8P05109 93 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 GPX1P07203 203 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 CISD3P0C7P0 127 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ZNF705BP0CI00 300 aaPredicted RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 SMIM6P0DI80 62 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 EVX1P49640 407 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 DYNLT3P51808 116 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 KRTAP10-2P60368 255 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 RPS25P62851 125 aaKnown RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 HBBP68871 147 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 HNRNPA0Q13151 305 aaKnown RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 ZNF79Q15937 498 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 HSD17B12Q53GQ0 312 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 RNASE10Q5GAN6 216 aaKnown RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 LDLRAD2Q5SZI1 272 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TMEM244Q5VVB8 128 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 AAED1Q7RTV5 226 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 PRR15Q8IV56 129 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 LYG1Q8N1E2 194 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TEX29Q8N6K0 151 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 C15orf56Q8N910 161 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 WFDC11Q8NEX6 87 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 OR4S1Q8NGB4 309 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 OR4E2Q8NGC2 313 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 OR5H6Q8NGV6 325 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 BRK1Q8WUW1 75 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 COPS9Q8WXC6 57 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 FGF13Q92913 245 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 VOPP1Q96AW1 172 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 MCEEQ96PE7 176 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 RNF5Q99942 180 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TM2D3Q9BRN9 247 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 GGACTQ9BVM4 153 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TTTY13Q9BZ97 58 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 LINC00470Q9BZP3 86 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TMEM133Q9H2Q1 129 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 SMDT1Q9H4I9 107 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 BANF2Q9H503 90 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 MRPL16Q9NX20 251 aaKnown RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 NHP2Q9NX24 153 aaKnown RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 OR5AC2Q9NZP5 309 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 OR5V1Q9UGF6 321 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ERG28Q9UKR5 140 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 EPDR1Q9UM22 224 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 BAIAP2Q9UQB8 552 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 HS3ST2Q9Y278 367 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 LINC00588Q9Y4M8 146 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 U3KQK5 164 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ABCC3O15438 1527 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 DISP2A7MBM2 1401 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 PHLPP1O60346 1717 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SIGLEC1Q9BZZ2 1709 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 RALGAPBQ86X10 1494 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 DEPDC5O75140 1603 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 MYO3AQ8NEV4 1616 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SCN2AQ99250 2005 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 PRDM15P57071 1507 aaPredicted RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 ATP7AQ04656 1500 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ZNFX1Q9P2E3 1918 aaKnown RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 MROH2AA6NES4 1674 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ZNF142P52746 1687 aaPredicted RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 ROBO1Q9Y6N7 1651 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 LOC107984640A0A0U1RRK4 108 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 A0A1W2PQD3 144 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 OR2T8A6NH00 312 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 H3BPC8 53 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 C19orf84I3L1E1 186 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SDCBPO00560 298 aaPredicted RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 LECT2O14960 151 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 RER1O15258 196 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 LYRM1O43325 122 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SYNGR2O43760 224 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 LHBP01229 141 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 MT-ND4LP03901 98 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 HLA-EP13747 358 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ZNF19P17023 458 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 VEGFCP49767 419 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 RAB5CP51148 216 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 INSL3P51460 131 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ZNF80P51504 273 aaPredicted RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 ARPP19P56211 112 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ZNF117Q03924 483 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SLC38A11Q08AI6 406 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 MRGPRG-AS1Q2M3A8 158 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 LINC01554Q52M75 96 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 ZNF660Q6AZW8 331 aaPredicted RBP1.37□□□□□ -2.19
RTF1-207ENST00000561076 AMMECR1LQ6DCA0 310 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 C22orf39Q6P5X5 142 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 Q6ZS52 159 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SLC35E3Q7Z769 313 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 LHFPL1Q86WI0 220 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 MSRB3Q8IXL7 192 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SAXO1Q8IYX7 474 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 RPRMLQ8N4K4 120 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 TCTEX1D1Q8N7M0 179 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 SIGLECL1Q8N7X8 197 aa1.37□□□□□ -2.19
RTF1-207ENST00000561076 OR10P1Q8NGE3 313 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms