RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 PRSS8Q16651 343 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 ATP6V1FQ16864 119 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
SMAD3-215ENST00000560424 HSD17B13Q7Z5P4 300 aaPredicted RBP7.05□□□□□ -1.28
SMAD3-215ENST00000560424 PPP1R27Q86WC6 154 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 BAP18Q8IXM2 172 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 OR1L8Q8NGR8 309 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 PINX1Q96BK5 328 aaKnown RBP7.05□□□□□ -1.28
SMAD3-215ENST00000560424 CLCC1Q96S66 551 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 GGACTQ9BVM4 153 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 ZNF471Q9BX82 626 aaPredicted RBP7.05□□□□□ -1.28
SMAD3-215ENST00000560424 COMMD5Q9GZQ3 224 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 ZNF430Q9H8G1 570 aaPredicted RBP7.05□□□□□ -1.28
SMAD3-215ENST00000560424 TPSG1Q9NRR2 321 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 SIGLEC8Q9NYZ4 499 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 UBQLN2Q9UHD9 624 aa7.05□□□□□ -1.28
SMAD3-215ENST00000560424 STRAPQ9Y3F4 350 aaKnown RBP7.05□□□□□ -1.28
SMAD3-215ENST00000560424 BORCS7-ASMTA0A0B4J1R7 106 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 TEX50A0A1B0GTY4 177 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 C15orf62A8K5M9 175 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 CEBPZOSA8MTT3 80 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 FNDC10F2Z333 226 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 RRHO14718 337 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 NBR2O15453 112 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 CFDP00746 253 aaPredicted RBP7.04□□□□□ -1.28
SMAD3-215ENST00000560424 HLA-DRB1P01911 266 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 IAPPP10997 89 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 NHLH2Q02577 135 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 TMEM267Q0VDI3 215 aaPredicted RBP7.04□□□□□ -1.28
SMAD3-215ENST00000560424 EXOSC2Q13868 293 aaKnown RBP7.04□□□□□ -1.28
SMAD3-215ENST00000560424 VWC2Q2TAL6 325 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 CLLU1Q5K131 121 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 PVRIGQ6DKI7 326 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 EIF5AL1Q6IS14 154 aaKnown RBP7.04□□□□□ -1.28
SMAD3-215ENST00000560424 ZNF114Q8NC26 417 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 OR9G4Q8NGQ1 327 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 OR5C1Q8NGR4 320 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 SCARB1Q8WTV0 552 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 RITA1Q96K30 269 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 ATP5SQ99766 215 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 GINS3Q9BRX5 216 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 ZC4H2Q9NQZ6 224 aa7.04□□□□□ -1.28
SMAD3-215ENST00000560424 IGHV7-81A0A0B4J1V7 117 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 PRSS46E5RG02 174 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 NXPH3O95157 252 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 SEC11BP0C7V7 166 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 PLGLAQ15195 96 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 C5orf64Q2M2E5 130 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 C2orf83Q53S99 150 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 SPANXN5Q5MJ07 72 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
SMAD3-215ENST00000560424 SLC24A4Q8NFF2 622 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 OR10P1Q8NGE3 313 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 OR1S2Q8NGQ3 325 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 LRRC20Q8TCA0 184 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 SRD5A3Q9H8P0 318 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 ENY2Q9NPA8 101 aa7.03□□□□□ -1.28
SMAD3-215ENST00000560424 HEYLQ9NQ87 328 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-215ENST00000560424 CGB1A6NKQ9 187 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 H3BP45 60 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 SOX15O60248 233 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 CST7O76096 145 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 ACTL6BO94805 426 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 NDUFB8O95169 186 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 METTL15P1P0C7V9 234 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 SPP1P10451 314 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 NPY1RP25929 384 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 HOXA1P49639 335 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-215ENST00000560424 RAB11AP62491 216 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 DLK1P80370 383 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-215ENST00000560424 ERHP84090 104 aaKnown RBP7.02□□□□□ -1.29
SMAD3-215ENST00000560424 ZNF562Q6V9R5 426 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 LINC00322Q6ZN03 302 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-215ENST00000560424 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 SLC25A32Q9H2D1 315 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 WFDC1Q9HC57 220 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 ZNF355PQ9NSJ1 428 aa7.02□□□□□ -1.29
SMAD3-215ENST00000560424 METTL1Q9UBP6 276 aaKnown RBP7.02□□□□□ -1.29
SMAD3-215ENST00000560424 A0A1B0GW64 132 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 RPS10-NUDT3A0A1W2PQS6 291 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 IGLC7A0M8Q6 106 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 OR11H12B2RN74 326 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 IFNA10P01566 189 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 TRGV3P03979 118 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 RPL27AP46776 148 aaKnown RBP7.01□□□□□ -1.29
SMAD3-215ENST00000560424 RAB5CP51148 216 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 SYNJ2BPP57105 145 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 SLC38A11Q08AI6 406 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 ARL16Q0P5N6 197 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 PJVKQ0ZLH3 352 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 UNQ5815/PRO19632Q6UWF5 114 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 RNASEH2CQ8TDP1 164 aaKnown RBP7.01□□□□□ -1.29
SMAD3-215ENST00000560424 TMEM170AQ8WVE7 144 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 CACNG8Q8WXS5 425 aa7.01□□□□□ -1.29
SMAD3-215ENST00000560424 GNPNAT1Q96EK6 184 aaPredicted RBP7.01□□□□□ -1.29
SMAD3-215ENST00000560424 BSCL2Q96G97 398 aaPredicted RBP7.01□□□□□ -1.29
SMAD3-215ENST00000560424 PSMG3Q9BT73 122 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms