RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 TMEM190Q8WZ59 177 aa7.73□□□□□ -1.17
USP3-216ENST00000559873 GINS3Q9BRX5 216 aa7.73□□□□□ -1.17
USP3-216ENST00000559873 GGACTQ9BVM4 153 aa7.73□□□□□ -1.17
USP3-216ENST00000559873 ZC4H2Q9NQZ6 224 aa7.73□□□□□ -1.17
USP3-216ENST00000559873 ZNF320A2RRD8 509 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 ZFP92A6NM28 416 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 TMEM50AO95807 157 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 CTSGP08311 255 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 IGLC1P0CG04 106 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 BMI1P35226 326 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 ADMP35318 185 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 NUP62P37198 522 aaPredicted RBP7.72□□□□□ -1.17
USP3-216ENST00000559873 ELLP55199 621 aaPredicted RBP7.72□□□□□ -1.17
USP3-216ENST00000559873 BAXQ07812 192 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 GAMTQ14353 236 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 LILRB2Q8N423 598 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 NPIPB3Q92617 1050 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 MARC2Q969Z3 335 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 CHRDL1Q9BU40 450 aa7.72□□□□□ -1.17
USP3-216ENST00000559873 PRSS46E5RG02 174 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 YIF1AO95070 293 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 CFDP00746 253 aaPredicted RBP7.71□□□□□ -1.18
USP3-216ENST00000559873 S100A11P31949 105 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 YPEL3P61236 119 aaPredicted RBP7.71□□□□□ -1.18
USP3-216ENST00000559873 SLC38A11Q08AI6 406 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 TMEM252Q8N6L7 170 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 Q8WTZ3 238 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 NARS2Q96I59 477 aaKnown RBP7.71□□□□□ -1.18
USP3-216ENST00000559873 C20orf24Q9BUV8 137 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 DAZ1Q9NQZ3 744 aaKnown RBP7.71□□□□□ -1.18
USP3-216ENST00000559873 MBD2Q9UBB5 411 aa7.71□□□□□ -1.18
USP3-216ENST00000559873 IGHV3-35A0A0C4DH35 117 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 FAM24AA6NFZ4 105 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 PMS2P5A8MQ11 134 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 CST7O76096 145 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 TOMM40O96008 361 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 S100A7P31151 101 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 MLANAQ16655 118 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 ATP6V1FQ16864 119 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 TIGITQ495A1 244 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 Q6ZNX1 250 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 TMEM144Q7Z5S9 345 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 TMEM217Q8N7C4 229 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 THAP8Q8NA92 274 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 OR2T35Q8NGX2 323 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 DYNLRB2Q8TF09 96 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 TRGV9Q99603 122 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 TMEM147Q9BVK8 224 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 NPVFQ9HCQ7 196 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 UQCC1Q9NVA1 299 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 SIGLEC8Q9NYZ4 499 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 OR5AC2Q9NZP5 309 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 MRPL36Q9P0J6 103 aaKnown RBP7.7□□□□□ -1.18
USP3-216ENST00000559873 PFDN2Q9UHV9 154 aa7.7□□□□□ -1.18
USP3-216ENST00000559873 PUS1Q9Y606 427 aaKnown RBP eCLIP7.7□□□□□ -1.18
USP3-216ENST00000559873 VWFP04275 2813 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 IGSF23A1L1A6 192 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 C2orf70A6NJV1 201 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 K7EMT4 169 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 WIPF1O43516 503 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 IGKV1-17P01599 117 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 RD3LP0DJH9 198 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 IGLL1P15814 213 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 RPL12P30050 165 aaKnown RBP7.69□□□□□ -1.18
USP3-216ENST00000559873 SELENOTP62341 195 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 EWSR1Q01844 656 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP3-216ENST00000559873 RAB31Q13636 194 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 SAMD5Q5TGI4 173 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 TEPPQ6URK8 271 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 OR51G1Q8NGK1 321 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 OR2K2Q8NGT1 345 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 METTL26Q96S19 204 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 TMEM231Q9H6L2 316 aa7.69□□□□□ -1.18
USP3-216ENST00000559873 TECRQ9NZ01 308 aaKnown RBP7.69□□□□□ -1.18
USP3-216ENST00000559873 MRPL27Q9P0M9 148 aaKnown RBP7.69□□□□□ -1.18
USP3-216ENST00000559873 TMEM213A2RRL7 107 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 H0YIZ8 118 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 CCNKO75909 580 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 IL4P05112 153 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 LYL1P12980 280 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 FOLR2P14207 255 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 LCN12Q6JVE5 192 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 TOMM20LQ6UXN7 152 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 UNQ9165/PRO28630Q6UXU0 137 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 S100A7AQ86SG5 101 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 ZNF546Q86UE3 836 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 HAPLN4Q86UW8 402 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 INO80EQ8NBZ0 244 aaPredicted RBP7.68□□□□□ -1.18
USP3-216ENST00000559873 BPIFCQ8NFQ6 507 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 OR5C1Q8NGR4 320 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 WDR89Q96FK6 387 aaPredicted RBP7.68□□□□□ -1.18
USP3-216ENST00000559873 GRAMD2BQ96HH9 432 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 KCNIP2Q9NS61 270 aa7.68□□□□□ -1.18
USP3-216ENST00000559873 NOTCH1P46531 2555 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 TRAV14DV4A0A0A6YYC5 116 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 IGHV7-4-1A0A0J9YVY3 117 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 UBE2L5PA0A1B0GUS4 154 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 A0A1W2PS18 150 aa7.67□□□□□ -1.18
USP3-216ENST00000559873 MPDU1O75352 247 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms