RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LYRM1O43325 122 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 ZNF207O43670 478 aaKnown RBP3.29□□□□□ -1.88
SNX1-205ENST00000559339 HOXB5P09067 269 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 CD7P09564 240 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 OR4E1P0C645 316 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 OR10J1P30954 320 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 NUP62P37198 522 aaPredicted RBP3.29□□□□□ -1.88
SNX1-205ENST00000559339 RND2P52198 227 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 AP2S1P53680 142 aaPredicted RBP3.29□□□□□ -1.88
SNX1-205ENST00000559339 YPEL3P61236 119 aaPredicted RBP3.29□□□□□ -1.88
SNX1-205ENST00000559339 DHRS2Q13268 280 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 PVRIGQ6DKI7 326 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 C11orf87Q6NUJ2 197 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 MZT2BQ6NZ67 158 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 TOMM20LQ6UXN7 152 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 ADAMTSL5Q6ZMM2 481 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 DEFB125Q8N687 156 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 ACY3Q96HD9 319 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 GRAMD2BQ96HH9 432 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 RCHY1Q96PM5 261 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 SPATA25Q9BR10 227 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 WDR12Q9GZL7 423 aaKnown RBP3.29□□□□□ -1.88
SNX1-205ENST00000559339 RBKSQ9H477 322 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 FNDC4Q9H6D8 234 aaPredicted RBP3.29□□□□□ -1.88
SNX1-205ENST00000559339 SRD5A3Q9H8P0 318 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 C19orf73Q9NVV2 129 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 SMPXQ9UHP9 88 aa3.29□□□□□ -1.88
SNX1-205ENST00000559339 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 IGHV3OR16-13A0A075B7E8 117 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 LOC102724200A0A096LPH7 203 aaPredicted RBP3.28□□□□□ -1.88
SNX1-205ENST00000559339 IGHV3-49A0A0A0MS15 119 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 IGHV3-74A0A0B4J1X5 117 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 FAM240BA0A1B0GVZ2 78 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 HELTA6NFD8 242 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 ZFP92A6NM28 416 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 SNRPGP15A8MWD9 76 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 SYNGR2O43760 224 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 PITX3O75364 302 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 TCRBP04435 133 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 IL4P05112 153 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 IGLC1P0CG04 106 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 EDN2P20800 178 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 S100A7P31151 101 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 GPX4P36969 197 aaPredicted RBP3.28□□□□□ -1.88
SNX1-205ENST00000559339 NKX2-1P43699 371 aaPredicted RBP3.28□□□□□ -1.88
SNX1-205ENST00000559339 APOC4P55056 127 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 ZNF846Q147U1 533 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 MLANAQ16655 118 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 HAGHQ16775 308 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 SPANXN5Q5MJ07 72 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 GGNBP1Q5YKI7 109 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 PRSS54Q6PEW0 395 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 LYG2Q86SG7 212 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 OR1S2Q8NGQ3 325 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 NPIPB3Q92617 1050 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 SLC35E1Q96K37 410 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 RNF2Q99496 336 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 SDHCQ99643 169 aaPredicted RBP3.28□□□□□ -1.88
SNX1-205ENST00000559339 FAM110AQ9BQ89 295 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 TM2D3Q9BRN9 247 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 GGTLC1Q9BX51 225 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 C20orf85Q9H1P6 137 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 BATF3Q9NR55 127 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 NUDT15Q9NV35 164 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 PTTG2Q9NZH5 202 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 FLVCR2Q9UPI3 526 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 STRAPQ9Y3F4 350 aaKnown RBP3.28□□□□□ -1.88
SNX1-205ENST00000559339 SELENOKQ9Y6D0 94 aa3.28□□□□□ -1.88
SNX1-205ENST00000559339 TRAV6A0A075B6T7 132 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 TRAV2A0A0B4J234 112 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 IGHV3-66A0A0C4DH42 116 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 FAM25EA8MYX2 175 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 C3orf84H3BNL1 204 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 UBE2CO00762 179 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 EREGO14944 169 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 PLA2G10O15496 165 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 ADAP1O75689 374 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 DFFBO76075 338 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 SCGB1D2O95969 90 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 TOMM40O96008 361 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 CFDP00746 253 aaPredicted RBP3.27□□□□□ -1.89
SNX1-205ENST00000559339 IGKV1-17P01599 117 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 HNRNPCP07910 306 aaKnown RBP eCLIP3.27□□□□□ -1.89
SNX1-205ENST00000559339 IAPPP10997 89 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 ANXA7P20073 488 aaKnown RBP3.27□□□□□ -1.89
SNX1-205ENST00000559339 CRYBB3P26998 211 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 BTCP35070 178 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 P2RY1P47900 373 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 TFPI2P48307 235 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 DEFA1P59665 94 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 DEFA3P59666 94 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 SNRPD3P62318 126 aaKnown RBP3.27□□□□□ -1.89
SNX1-205ENST00000559339 AKR1C1Q04828 323 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 GAMTQ14353 236 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 IAH1Q2TAA2 248 aaPredicted RBP3.27□□□□□ -1.89
SNX1-205ENST00000559339 TIGITQ495A1 244 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 TCF24Q7RTU0 167 aa3.27□□□□□ -1.89
SNX1-205ENST00000559339 S100A7AQ86SG5 101 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms