RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SULT1A4P0DMN0 295 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 S100A5P33763 92 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 OPRK1P41145 380 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 CCR6P51684 374 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 TMEM187Q14656 261 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 ODF3L2Q3SX64 289 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 SPINK9Q5DT21 86 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 NMSQ5H8A3 153 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 TMEM268Q5VZI3 342 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 LHFPL5Q8TAF8 219 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 SLC25A21Q9BQT8 299 aaPredicted RBP7.5□□□□□ -1.21
USP3-207ENST00000558218 FNDC4Q9H6D8 234 aaPredicted RBP7.5□□□□□ -1.21
USP3-207ENST00000558218 MCUBQ9NWR8 336 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 CACNG5Q9UF02 275 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 PUS1Q9Y606 427 aaKnown RBP eCLIP7.5□□□□□ -1.21
USP3-207ENST00000558218 SELENOKQ9Y6D0 94 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 U3KQ87 197 aa7.5□□□□□ -1.21
USP3-207ENST00000558218 IGHV3OR16-8A0A075B7F1 116 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 LCE6AA0A183 80 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 A0A1B0GU03 582 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 DUXBA0A1W2PPF3 345 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 CEBPZOSA8MTT3 80 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 SPRY2O43597 315 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 CRYBB3P26998 211 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 YPEL3P61236 119 aaPredicted RBP7.49□□□□□ -1.21
USP3-207ENST00000558218 TMEM128Q5BJH2 165 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 LGI3Q8N145 548 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 TOMM5Q8N4H5 51 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 SLC24A4Q8NFF2 622 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 NARS2Q96I59 477 aaKnown RBP7.49□□□□□ -1.21
USP3-207ENST00000558218 METTL26Q96S19 204 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 MAP6D1Q9H9H5 199 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 RETNQ9HD89 108 aa7.49□□□□□ -1.21
USP3-207ENST00000558218 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
USP3-207ENST00000558218 RGS13O14921 159 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 AKR1C4P17516 323 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 EIF2B2P49770 351 aaKnown RBP7.48□□□□□ -1.21
USP3-207ENST00000558218 AP2S1P53680 142 aaPredicted RBP7.48□□□□□ -1.21
USP3-207ENST00000558218 TNFRSF9Q07011 255 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 KLF9Q13886 244 aaPredicted RBP7.48□□□□□ -1.21
USP3-207ENST00000558218 SMCO1Q147U7 214 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 ZFAND6Q6FIF0 208 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 TCF24Q7RTU0 167 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 OR1S2Q8NGQ3 325 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 Q8WTZ3 238 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 TMEM230Q96A57 120 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 RNF183Q96D59 192 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 GRAMD2BQ96HH9 432 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 HSPB7Q9UBY9 170 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 UBQLN2Q9UHD9 624 aa7.48□□□□□ -1.21
USP3-207ENST00000558218 DNASE2O00115 360 aaPredicted RBP7.47□□□□□ -1.21
USP3-207ENST00000558218 IGKV1-17P01599 117 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 SLC25A6P12236 298 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 SUPT4H1P63272 117 aaKnown RBP7.47□□□□□ -1.21
USP3-207ENST00000558218 PYDC2Q56P42 97 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 PRSS54Q6PEW0 395 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 CCDC190Q86UF4 302 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 TMEM217Q8N7C4 229 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 LRTM2Q8N967 370 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 GATAD1Q8WUU5 269 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 ST8SIA2Q92186 375 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 TRIM63Q969Q1 353 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
USP3-207ENST00000558218 IGHV3-49A0A0A0MS15 119 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 HELTA6NFD8 242 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 CCDC160A6NGH7 325 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 MPTX1A8MV57 137 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 FAM90A26D6RGX4 464 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 IFNA10P01566 189 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 APOHP02749 345 aaPredicted RBP7.46□□□□□ -1.22
USP3-207ENST00000558218 IGLC1P0CG04 106 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 NPY1RP25929 384 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 GPX4P36969 197 aaPredicted RBP7.46□□□□□ -1.22
USP3-207ENST00000558218 RPL11P62913 178 aaKnown RBP7.46□□□□□ -1.22
USP3-207ENST00000558218 SPANXN2Q5MJ10 180 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 LYZL2Q7Z4W2 148 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 LILRB2Q8N423 598 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 MS4A6AQ9H2W1 248 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 SEPSECSQ9HD40 501 aaKnown RBP7.46□□□□□ -1.22
USP3-207ENST00000558218 MRPL36Q9P0J6 103 aaKnown RBP7.46□□□□□ -1.22
USP3-207ENST00000558218 PFDN2Q9UHV9 154 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 V9GYH0 126 aa7.46□□□□□ -1.22
USP3-207ENST00000558218 IGHV3OR16-13A0A075B7E8 117 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 IGHV3-74A0A0B4J1X5 117 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 NAP1L6A6NFF2 107 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 PITX3O75364 302 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 MED6O75586 246 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 JTBO76095 146 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 OR10J1P30954 320 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 P2RY1P47900 373 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 RND2P52198 227 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 UBE2MP61081 183 aaKnown RBP7.45□□□□□ -1.22
USP3-207ENST00000558218 ZNF79Q15937 498 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 TIGITQ495A1 244 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 TMEM41BQ5BJD5 291 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 GBGT1Q8N5D6 347 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 DTD1Q8TEA8 209 aa7.45□□□□□ -1.22
USP3-207ENST00000558218 TMEM170AQ8WVE7 144 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms