RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 RNF17Q9BXT8 1623 aaKnown RBP2.2□□□□□ -2.06
FOXN3-217ENST00000557572 CAMSAP2Q08AD1 1489 aa2.2□□□□□ -2.06
FOXN3-217ENST00000557572 PLA2R1Q13018 1463 aa2.2□□□□□ -2.06
FOXN3-217ENST00000557572 TCOF1Q13428 1488 aaKnown RBP2.2□□□□□ -2.06
FOXN3-217ENST00000557572 SVILO95425 2214 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 ZNF609O15014 1411 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 N4BP2Q86UW6 1770 aaPredicted RBP2.19□□□□□ -2.06
FOXN3-217ENST00000557572 TRAV38-1A0A0B4J264 116 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 KLF18A0A0U1RQI7 1052 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 PVALEFA0A1B0GWK0 134 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 C20orf202A1L168 122 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 TMEM256-PLSCR3K7ERE1 68 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 CORTO00230 105 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 NPFFO15130 113 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 LYZL6O75951 148 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 CXCL1P09341 107 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 ZNF728P0DKX0 622 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 RBM11P57052 281 aaKnown RBP2.19□□□□□ -2.06
FOXN3-217ENST00000557572 RPL30P62888 115 aaKnown RBP2.19□□□□□ -2.06
FOXN3-217ENST00000557572 CCL20P78556 96 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 SYCNQ0VAF6 134 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 AADACL3Q5VUY0 350 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 FAM104BQ5XKR9 115 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 AMMECR1LQ6DCA0 310 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 TEX29Q8N6K0 151 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 OR8A1Q8NGG7 326 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 OR2T10Q8NGZ9 312 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 WFDC5Q8TCV5 224 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 TMEM106AQ96A25 262 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 DERL1Q9BUN8 251 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 TMEM133Q9H2Q1 129 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 CST9LQ9H4G1 147 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 RNF122Q9H9V4 155 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 FAM60AQ9NP50 221 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 CBLN4Q9NTU7 201 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 KLK5Q9Y337 293 aaPredicted RBP2.19□□□□□ -2.06
FOXN3-217ENST00000557572 PHLDA3Q9Y5J5 127 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 ANKRD12Q6UB98 2062 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 VWDEQ8N2E2 1590 aa2.19□□□□□ -2.06
FOXN3-217ENST00000557572 CUL7Q14999 1698 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 SBF1O95248 1867 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 CDK13Q14004 1512 aaKnown RBP2.18□□□□□ -2.06
FOXN3-217ENST00000557572 SZT2Q5T011 3432 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 LRP6O75581 1613 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 LTBP1Q14766 1721 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 FAM236AA0A1B0GUQ0 79 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 FAM236BA0A1B0GV22 79 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 TMEM212A6NML5 194 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 A8MWP4 228 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 C11orf94C9JXX5 98 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 UBE2L6O14933 153 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 RBFOX2O43251 390 aaKnown RBP eCLIP2.18□□□□□ -2.06
FOXN3-217ENST00000557572 HLA-DQA1P01909 254 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 TRGV3P03979 118 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 IGHV4-34P06331 123 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 PAEPP09466 180 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 CASP1P29466 404 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 TAS2R45P59539 299 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 COPZ1P61923 177 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 IL17AQ16552 155 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 CROCCP2Q86T23 111 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 PCP2Q8IVA1 136 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 ZNF695Q8IW36 515 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 RNF175Q8N4F7 328 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 ZFAND2AQ8N6M9 145 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 POM121L12Q8N7R1 296 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 ZFP62Q8NB50 900 aaPredicted RBP2.18□□□□□ -2.06
FOXN3-217ENST00000557572 OR10G2Q8NGC3 310 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 RPS4Y2Q8TD47 263 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 CHCHD7Q9BUK0 85 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 C1QTNF6Q9BXI9 259 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 TUBA4BQ9H853 241 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 TAF9BQ9HBM6 251 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 SCN3BQ9NY72 215 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 C21orf62Q9NYP8 219 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 IL36BQ9NZH7 164 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 BAIAP2Q9UQB8 552 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 LINC00588Q9Y4M8 146 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 ECM29Q5VYK3 1845 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 NUP205Q92621 2012 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 SCAF11Q99590 1463 aaKnown RBP2.18□□□□□ -2.06
FOXN3-217ENST00000557572 COL18A1P39060 1754 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 BAHCC1Q9P281 2608 aa2.18□□□□□ -2.06
FOXN3-217ENST00000557572 PPIP5K1Q6PFW1 1433 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 ARHGEF12Q9NZN5 1544 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 ANKRD11Q6UB99 2663 aaPredicted RBP2.17□□□□□ -2.06
FOXN3-217ENST00000557572 SIPA1L1O43166 1804 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 ATG2AQ2TAZ0 1938 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 IGHV3-21A0A0B4J1V1 117 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 TRBV7-6A0A0J9YX20 115 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 IGHV3-64DA0A0J9YX35 117 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 K7ERJ3 54 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 CCL25O15444 150 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 GGCTO75223 188 aaKnown RBP2.17□□□□□ -2.06
FOXN3-217ENST00000557572 NAPSAO96009 420 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 IGKV1D-33P01593 117 aa2.17□□□□□ -2.06
FOXN3-217ENST00000557572 IGKV1-33P01594 117 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms