RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IFNA4P05014 189 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 RND2P52198 227 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 PRSS54Q6PEW0 395 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 SLC24A4Q8NFF2 622 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 OR51S1Q8NGJ8 323 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 OR1S2Q8NGQ3 325 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 RNASEH2CQ8TDP1 164 aaKnown RBP16.5■□□□□ 0.23
ACTN1-220ENST00000556433 PRRT1Q99946 306 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 TMEM56-RWDD3S4R434 201 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 ZNF688P0C7X2 276 aa16.49■□□□□ 0.23
ACTN1-220ENST00000556433 IGLC1P0CG04 106 aa16.49■□□□□ 0.23
ACTN1-220ENST00000556433 SLC25A4P12235 298 aa16.49■□□□□ 0.23
ACTN1-220ENST00000556433 CLVS1Q8IUQ0 354 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-220ENST00000556433 RABL2AQ9UBK7 228 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-220ENST00000556433 RABL2BQ9UNT1 228 aa16.49■□□□□ 0.23
ACTN1-220ENST00000556433 NXPH3O95157 252 aa16.48■□□□□ 0.23
ACTN1-220ENST00000556433 OR10J1P30954 320 aa16.48■□□□□ 0.23
ACTN1-220ENST00000556433 TRPT1Q86TN4 253 aaKnown RBP16.48■□□□□ 0.23
ACTN1-220ENST00000556433 KCNIP3Q9Y2W7 256 aa16.48■□□□□ 0.23
ACTN1-220ENST00000556433 U3KQE9 123 aa16.48■□□□□ 0.23
ACTN1-220ENST00000556433 KNCNA6PVL3 124 aa16.47■□□□□ 0.23
ACTN1-220ENST00000556433 EIF2B2P49770 351 aaKnown RBP16.47■□□□□ 0.23
ACTN1-220ENST00000556433 YPEL3P61236 119 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-220ENST00000556433 ETFRF1Q6IPR1 90 aa16.47■□□□□ 0.23
ACTN1-220ENST00000556433 DCANP1Q8TF63 244 aa16.47■□□□□ 0.23
ACTN1-220ENST00000556433 TMEM170AQ8WVE7 144 aa16.47■□□□□ 0.23
ACTN1-220ENST00000556433 PRR13Q9NZ81 148 aa16.47■□□□□ 0.23
ACTN1-220ENST00000556433 AGRNO00468 2067 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 ANKRD20A5PA0PJZ0 165 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 HELTA6NFD8 242 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 HNRNPCP07910 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
ACTN1-220ENST00000556433 GIG44P09565 113 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-220ENST00000556433 SULT1A3P0DMM9 295 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 SULT1A4P0DMN0 295 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 NPY1RP25929 384 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 DHRS2Q13268 280 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 LGALS9CQ6DKI2 356 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 MORN3Q6PF18 240 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-220ENST00000556433 C16orf54Q6UWD8 224 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 NOXA1Q86UR1 476 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 RPP25LQ8N5L8 163 aaKnown RBP16.46■□□□□ 0.23
ACTN1-220ENST00000556433 DYNC2LI1Q8TCX1 351 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 RAB2BQ8WUD1 216 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 NPIPB3Q92617 1050 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 IL22RA2Q969J5 263 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 CCDC59Q9P031 241 aaKnown RBP16.46■□□□□ 0.23
ACTN1-220ENST00000556433 CACFD1Q9UGQ2 172 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 SCP2D1Q9UJQ7 156 aa16.46■□□□□ 0.23
ACTN1-220ENST00000556433 GSTZ1O43708 216 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-220ENST00000556433 SPP1P10451 314 aa16.45■□□□□ 0.22
ACTN1-220ENST00000556433 AP2S1P53680 142 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-220ENST00000556433 TMEM41BQ5BJD5 291 aa16.45■□□□□ 0.22
ACTN1-220ENST00000556433 ACTL10Q5JWF8 245 aa16.45■□□□□ 0.22
ACTN1-220ENST00000556433 ACY3Q96HD9 319 aa16.45■□□□□ 0.22
ACTN1-220ENST00000556433 SCGB3A2Q96PL1 93 aa16.45■□□□□ 0.22
ACTN1-220ENST00000556433 NMSQ5H8A3 153 aa16.44■□□□□ 0.22
ACTN1-220ENST00000556433 GLMPQ8WWB7 406 aa16.44■□□□□ 0.22
ACTN1-220ENST00000556433 MCUBQ9NWR8 336 aa16.44■□□□□ 0.22
ACTN1-220ENST00000556433 RSL24D1Q9UHA3 163 aaKnown RBP16.44■□□□□ 0.22
ACTN1-220ENST00000556433 KMT2AQ03164 3969 aa16.44■□□□□ 0.22
ACTN1-220ENST00000556433 DEDDO75618 318 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 IFNA10P01566 189 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 IL4P05112 153 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 RD3LP0DJH9 198 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 AKR1C4P17516 323 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 TMBIM6P55061 237 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 USF2Q15853 346 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-220ENST00000556433 Q8NAQ8 132 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 C2CD4CQ8TF44 421 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 RAB40CQ96S21 281 aa16.43■□□□□ 0.22
ACTN1-220ENST00000556433 C4BPBP20851 252 aa16.42■□□□□ 0.22
ACTN1-220ENST00000556433 CCR6P51684 374 aa16.42■□□□□ 0.22
ACTN1-220ENST00000556433 PSMG4Q5JS54 123 aa16.42■□□□□ 0.22
ACTN1-220ENST00000556433 LYZL2Q7Z4W2 148 aa16.42■□□□□ 0.22
ACTN1-220ENST00000556433 BCL7BQ9BQE9 202 aa16.42■□□□□ 0.22
ACTN1-220ENST00000556433 U3KQ87 197 aa16.42■□□□□ 0.22
ACTN1-220ENST00000556433 A0A0B4J2A0 478 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 IGHV4-28A0A0C4DH34 117 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 TOMM40O96008 361 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 RBMY1A1P0DJD3 496 aaKnown RBP16.41■□□□□ 0.22
ACTN1-220ENST00000556433 RBMY1CP0DJD4 496 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 SMCO1Q147U7 214 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 RBMY1FQ15415 496 aaKnown RBP16.41■□□□□ 0.22
ACTN1-220ENST00000556433 HSPB7Q9UBY9 170 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 SHPKQ9UHJ6 478 aa16.41■□□□□ 0.22
ACTN1-220ENST00000556433 FABP12A6NFH5 140 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 MIFP14174 115 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 TNFSF8P32971 234 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 LGI3Q8N145 548 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 DTD1Q8TEA8 209 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 HRH4Q9H3N8 390 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 RBKSQ9H477 322 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 CLEC5AQ9NY25 188 aa16.4■□□□□ 0.22
ACTN1-220ENST00000556433 ZNF705EA8MWA4 302 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-220ENST00000556433 BUB3O43684 328 aa16.39■□□□□ 0.21
ACTN1-220ENST00000556433 PSG1P11464 419 aa16.39■□□□□ 0.21
ACTN1-220ENST00000556433 SUPT4H1P63272 117 aaKnown RBP16.39■□□□□ 0.21
ACTN1-220ENST00000556433 KLF9Q13886 244 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-220ENST00000556433 OR51G1Q8NGK1 321 aa16.39■□□□□ 0.21
ACTN1-220ENST00000556433 SOSTQ9BQB4 213 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms