RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 DMRTA2Q96SC8 542 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 ANAPC10Q9UM13 185 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 LILRA1O75019 489 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 RFPL3SP0C7P2 107 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 PSG3Q16557 428 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 RNF182Q8N6D2 247 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 NUP37Q8NFH4 326 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 A0A1W2PR77 199 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 CDCP2Q5VXM1 449 aa14.54□□□□□ -0.08
SYNE3-204ENST00000555759 GTSCR1Q86UQ5 136 aa14.53□□□□□ -0.08
SYNE3-204ENST00000555759 RNF125Q96EQ8 232 aa14.53□□□□□ -0.08
SYNE3-204ENST00000555759 CECR9P0C854 216 aa14.53□□□□□ -0.08
SYNE3-204ENST00000555759 DEFB124Q8NES8 71 aa14.53□□□□□ -0.08
SYNE3-204ENST00000555759 IGLV3-12A0A075B6K2 115 aa14.53□□□□□ -0.08
SYNE3-204ENST00000555759 LOC105371242A0A075B767 164 aa14.53□□□□□ -0.08
SYNE3-204ENST00000555759 IFI27P40305 119 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-204ENST00000555759 D6R8Y8 96 aa14.52□□□□□ -0.08
SYNE3-204ENST00000555759 IGKV1-27A0A075B6S5 117 aa14.52□□□□□ -0.08
SYNE3-204ENST00000555759 FNDC10F2Z333 226 aa14.52□□□□□ -0.08
SYNE3-204ENST00000555759 GFRA4Q9GZZ7 299 aa14.52□□□□□ -0.08
SYNE3-204ENST00000555759 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.09
SYNE3-204ENST00000555759 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.09
SYNE3-204ENST00000555759 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.09
SYNE3-204ENST00000555759 RBMY1A1P0DJD3 496 aaKnown RBP14.52□□□□□ -0.09
SYNE3-204ENST00000555759 RBMY1CP0DJD4 496 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 LHX2P50458 406 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 ATG2BQ96BY7 2078 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 FAM231BA6NCW3 169 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 C9orf118A6NHY6 69 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 CACNA1IQ9P0X4 2223 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 TMEM238C9JI98 176 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 SAP25Q8TEE9 199 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 DPM3Q9P2X0 92 aa14.52□□□□□ -0.09
SYNE3-204ENST00000555759 PSME4Q14997 1843 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 STPG1Q5TH74 334 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 SLC25A39Q9BZJ4 359 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-204ENST00000555759 TCRAP04437 139 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 RRN3P1Q2M238 152 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 TEX43Q6ZNM6 134 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 PPP1R32Q7Z5V6 425 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 JMJD8Q96S16 334 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 PDCD11Q14690 1871 aaKnown RBP14.51□□□□□ -0.09
SYNE3-204ENST00000555759 TRAV2A0A0B4J234 112 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 SRSF6Q13247 344 aaKnown RBP14.51□□□□□ -0.09
SYNE3-204ENST00000555759 TMEM42Q69YG0 159 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 Q6ZWC4 215 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 TIAF1O95411 115 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 CNTFRP26992 372 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 DMRTC2Q8IXT2 367 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-204ENST00000555759 BMPERQ8N8U9 685 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 NABP1Q96AH0 204 aa14.51□□□□□ -0.09
SYNE3-204ENST00000555759 FAM216BQ8N7L0 139 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 MTCL1Q9Y4B5 1905 aaKnown RBP14.5□□□□□ -0.09
SYNE3-204ENST00000555759 CDKN1BP46527 198 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 CHAC1Q9BUX1 264 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 TRBV7-9A0A0J9YWB2 115 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 C18orf32Q8TCD1 76 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 TMEM101Q96IK0 257 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 PNRC2Q9NPJ4 139 aaKnown RBP14.5□□□□□ -0.09
SYNE3-204ENST00000555759 COL4A5P29400 1685 aa14.5□□□□□ -0.09
SYNE3-204ENST00000555759 MAFAQ8NHW3 353 aaPredicted RBP14.5□□□□□ -0.09
SYNE3-204ENST00000555759 FOXH1O75593 365 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 PRTN3P24158 256 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 SPEM2Q0P670 501 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 IGHV2OR16-5A0A0B4J2B6 119 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 GHRHP01286 108 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 FOXF2Q12947 444 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 UNC13CQ8NB66 2214 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 K7EP13 123 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 KIF26BQ2KJY2 2108 aa14.49□□□□□ -0.09
SYNE3-204ENST00000555759 IMMP1LQ96LU5 166 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 SHANK3Q9BYB0 1731 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 COL11A2P13942 1736 aaPredicted RBP14.48□□□□□ -0.09
SYNE3-204ENST00000555759 IGHV2-26A0A0B4J1V2 119 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 IGHV3-35A0A0C4DH35 117 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 PRR7Q8TB68 274 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 HEATR5BQ9P2D3 2071 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 ASCL4Q6XD76 172 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 LOC285556D6RIA3 1793 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 TRAV8-1A0A0A6YYK1 113 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 TRAV21A0A0B4J279 112 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 FAM71F2Q6NXP2 309 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 C11orf68Q9H3H3 251 aaKnown RBP14.48□□□□□ -0.09
SYNE3-204ENST00000555759 EVI2AP22794 236 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 LYPD6BQ8NI32 183 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 SLC25A15Q9Y619 301 aa14.48□□□□□ -0.09
SYNE3-204ENST00000555759 NRXN2Q9P2S2 1712 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 C15orf62A8K5M9 175 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 K7EP34 96 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 NTF4P34130 210 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 TMEM155Q4W5P6 130 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 PATE3B3GLJ2 98 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 M0R2P5 195 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 RNF115Q9Y4L5 304 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 CHD5Q8TDI0 1954 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 PLXNA1Q9UIW2 1896 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 F8W1H4 67 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 SCN2AQ99250 2005 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 B9A039 149 aa14.47□□□□□ -0.09
SYNE3-204ENST00000555759 EFEMP2O95967 443 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms