RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 BEAN1Q3B7T3 259 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 TIGITQ495A1 244 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 TMEM14EPQ6UXP3 125 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 ACOT7LQ6ZUV0 252 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 MARC2Q969Z3 335 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 GINS3Q9BRX5 216 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
TUBB3-202ENST00000553656 SIGLEC8Q9NYZ4 499 aa10.55□□□□□ -0.72
TUBB3-202ENST00000553656 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 WIPF1O43516 503 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 DEDDO75618 318 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 FOLR2P14207 255 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 FCN2Q15485 313 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 TM4SF20Q53R12 229 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
TUBB3-202ENST00000553656 STX12Q86Y82 276 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 Q8WTZ3 238 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 PPP1R1CQ8WVI7 109 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 NOTCH3Q9UM47 2321 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
TUBB3-202ENST00000553656 PKD1L1Q8TDX9 2849 aa10.54□□□□□ -0.72
TUBB3-202ENST00000553656 IGHV3OR16-8A0A075B7F1 116 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 E5RGE8 158 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 K7EMT4 169 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 IGKV1-17P01599 117 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 CBLN1P23435 193 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 BMI1P35226 326 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 YPEL3P61236 119 aaPredicted RBP10.53□□□□□ -0.72
TUBB3-202ENST00000553656 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
TUBB3-202ENST00000553656 DLK1P80370 383 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 EGFEM1PQ0D2K5 195 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 IL34Q6ZMJ4 242 aa10.53□□□□□ -0.72
TUBB3-202ENST00000553656 LYRM2Q9NU23 88 aaPredicted RBP10.53□□□□□ -0.72
TUBB3-202ENST00000553656 TECRQ9NZ01 308 aaKnown RBP10.53□□□□□ -0.72
TUBB3-202ENST00000553656 MRPL27Q9P0M9 148 aaKnown RBP10.53□□□□□ -0.72
TUBB3-202ENST00000553656 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 PRSS46E5RG02 174 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.73
TUBB3-202ENST00000553656 CCNKO75909 580 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 CST7O76096 145 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 RD3LP0DJH9 198 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 CXCL3P19876 107 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 HBG1P69891 147 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 HBG2P69892 147 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 LCN12Q6JVE5 192 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 OR11H7Q8NGC8 314 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 NARS2Q96I59 477 aaKnown RBP10.52□□□□□ -0.73
TUBB3-202ENST00000553656 GGACTQ9BVM4 153 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
TUBB3-202ENST00000553656 TRAV14DV4A0A0A6YYC5 116 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 FNDC10F2Z333 226 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 MPC2O95563 127 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 TOMM40O96008 361 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 P2RY1P47900 373 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 SULT1A1P50225 295 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 SLC38A11Q08AI6 406 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 LILRB2Q8N423 598 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 TMEM252Q8N6L7 170 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 TMEM217Q8N7C4 229 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 ASB13Q8WXK3 278 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 METTL26Q96S19 204 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 TRGV9Q99603 122 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 OR5AC2Q9NZP5 309 aa10.51□□□□□ -0.73
TUBB3-202ENST00000553656 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
TUBB3-202ENST00000553656 IGSF23A1L1A6 192 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 IL4P05112 153 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 GIPP09681 153 aaPredicted RBP10.5□□□□□ -0.73
TUBB3-202ENST00000553656 EDN2P20800 178 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 NPPCP23582 126 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 DEFA6Q01524 100 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 BTNL8Q6UX41 500 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 TMEM144Q7Z5S9 345 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 THAP8Q8NA92 274 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 OR51G1Q8NGK1 321 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 THAP6Q8TBB0 222 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 WDR89Q96FK6 387 aaPredicted RBP10.5□□□□□ -0.73
TUBB3-202ENST00000553656 TMEM231Q9H6L2 316 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 NPVFQ9HCQ7 196 aa10.5□□□□□ -0.73
TUBB3-202ENST00000553656 IGHV7-4-1A0A0J9YVY3 117 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 CFDP00746 253 aaPredicted RBP10.49□□□□□ -0.73
TUBB3-202ENST00000553656 C8orf88P0DMB2 117 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 PSG1P11464 419 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 S100A11P31949 105 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 KRTAP10-11P60412 298 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 ZNF90Q03938 601 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 FGL1Q08830 312 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 DEFB114Q30KQ6 69 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 CD300EQ496F6 205 aaPredicted RBP10.49□□□□□ -0.73
TUBB3-202ENST00000553656 ADAMTSL5Q6ZMM2 481 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
TUBB3-202ENST00000553656 MBD2Q9UBB5 411 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms