RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CEBPGP53567 150 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 SUPT4H1P63272 117 aaKnown RBP1.75□□□□□ -2.13
SYNE2-210ENST00000553455 AESQ08117 197 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 KCNJ8Q15842 424 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 KRTAP21-3Q3LHN1 58 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 AADACL3Q5VUY0 350 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 TMEM86AQ8N2M4 240 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 LRRC25Q8N386 305 aaPredicted RBP1.75□□□□□ -2.13
SYNE2-210ENST00000553455 Q96M85 177 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 UCK1Q9HA47 277 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 NFAT5O94916 1531 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 BLMP54132 1417 aaPredicted RBP1.74□□□□□ -2.13
SYNE2-210ENST00000553455 MON2Q7Z3U7 1717 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 RTL1A6NKG5 1358 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 QRICH2Q9H0J4 1663 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 GLI3P10071 1580 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 IRGMA1A4Y4 181 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 ORC5O43913 435 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 E2F6O75461 281 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 RPP14O95059 124 aaKnown RBP1.74□□□□□ -2.13
SYNE2-210ENST00000553455 CDKN2CP42773 168 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 OMPP47874 163 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 RPS20P60866 119 aaKnown RBP1.74□□□□□ -2.13
SYNE2-210ENST00000553455 Q1T7F1 81 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 C10orf126Q8N4M7 172 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 C8orf76Q96K31 380 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 NIPSNAP1Q9BPW8 284 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 FBXL12Q9NXK8 326 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 MAP2P11137 1827 aaKnown RBP1.74□□□□□ -2.13
SYNE2-210ENST00000553455 NRAPQ86VF7 1730 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 ABCA3Q99758 1704 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 SMG6Q86US8 1419 aaKnown RBP1.74□□□□□ -2.13
SYNE2-210ENST00000553455 PIK3C2AO00443 1686 aa1.74□□□□□ -2.13
SYNE2-210ENST00000553455 UTRNP46939 3433 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 A0A087WUJ7 227 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 RPS4Y1P22090 263 aaKnown RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BOP23527 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BBP33778 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 ZNF80P51504 273 aaPredicted RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 FXYD2P54710 66 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BDP58876 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BCP62807 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HBA1P69905 142 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST2H2BEQ16778 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 ARHGAP11BQ3KRB8 267 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 LPCAT3Q6P1A2 487 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 FAM173BQ6P4H8 233 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BHQ93079 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 PPP1R14BQ96C90 147 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BNQ99877 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 HIST1H2BMQ99879 126 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 MRPL32Q9BYC8 188 aaKnown RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 C11orf68Q9H3H3 251 aaKnown RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 PRTFDC1Q9NRG1 225 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 BAIAP2Q9UQB8 552 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 PEAK1Q9H792 1746 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 PARP4Q9UKK3 1724 aaKnown RBP1.73□□□□□ -2.13
SYNE2-210ENST00000553455 FREM1Q5H8C1 2179 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 OTOGLQ3ZCN5 2332 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 OVOS2A0A0G2JMS6 1433 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 SBF2Q86WG5 1849 aa1.73□□□□□ -2.13
SYNE2-210ENST00000553455 RGPD5Q99666 1765 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 MYH11P35749 1972 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 BAZ2BQ9UIF8 2168 aaKnown RBP1.72□□□□□ -2.13
SYNE2-210ENST00000553455 COL24A1Q17RW2 1714 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 ANKRD26Q9UPS8 1709 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 MYOM1P52179 1685 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 PLCH1Q4KWH8 1693 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 ZNF831Q5JPB2 1677 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 PQLC2LA1A4F0 135 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 OR4C46A6NHA9 309 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 GOLGA6L19H0YKK7 550 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 TTRP02766 147 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 CLPSP04118 112 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 NFYAP23511 347 aaPredicted RBP1.72□□□□□ -2.13
SYNE2-210ENST00000553455 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 RPL22L1Q6P5R6 122 aaKnown RBP1.72□□□□□ -2.13
SYNE2-210ENST00000553455 DHFR2Q86XF0 187 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 ANKRD29Q8N6D5 301 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 OR8B3Q8NGG8 313 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 RASSF5Q8WWW0 418 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 DCUN1D1Q96GG9 259 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 TSPAN32Q96QS1 320 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 OR51V1Q9H2C8 321 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 CST9LQ9H4G1 147 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 LHFPL6Q9Y693 200 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 RGPD3A6NKT7 1758 aaPredicted RBP1.72□□□□□ -2.13
SYNE2-210ENST00000553455 RGPD4Q7Z3J3 1758 aa1.72□□□□□ -2.13
SYNE2-210ENST00000553455 PRRC2BQ5JSZ5 2229 aaKnown RBP1.71□□□□□ -2.14
SYNE2-210ENST00000553455 FAM208AQ9UK61 1670 aaKnown RBP1.71□□□□□ -2.14
SYNE2-210ENST00000553455 MEIKINA0A087WXM9 373 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 SMIM9A6NGZ8 99 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 AKR1C3P42330 323 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 MAGEA12P43365 314 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 DEFA1P59665 94 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 RUNX1Q01196 453 aa1.71□□□□□ -2.14
SYNE2-210ENST00000553455 FP248Q71RG6 208 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms