RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ELK1P19419 428 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 UBE2AP49459 152 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 NUDT2P50583 147 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 RAB5CP51148 216 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 ZNF141Q15928 474 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 LDLRAD2Q5SZI1 272 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 TIFABQ6ZNK6 161 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 RPP25LQ8N5L8 163 aaKnown RBP2.94□□□□□ -1.94
USP44-208ENST00000552440 ZNF525Q8N782 197 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 Q8N7P7 452 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 OR4S1Q8NGB4 309 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 OR2T10Q8NGZ9 312 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 DCANP1Q8TF63 244 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 SFT2D1Q8WV19 159 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 RNASE6Q93091 150 aaKnown RBP2.94□□□□□ -1.94
USP44-208ENST00000552440 E9PCH4 1651 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 LMO7Q8WWI1 1683 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 RAI1Q7Z5J4 1906 aaPredicted RBP2.94□□□□□ -1.94
USP44-208ENST00000552440 CRYBG1Q9Y4K1 1723 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 SPATA31E1Q6ZUB1 1445 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 IGHV5-10-1A0A0J9YXX1 117 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 GGT3PA6NGU5 568 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 GGTLC3B5MD39 225 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 H0YJW9 148 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 I3L521 148 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 M0R378 163 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CCL25O15444 150 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 IGKV1-5P01602 117 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 APODP05090 189 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 ZNF728P0DKX0 622 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HLA-EP13747 358 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BOP23527 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BBP33778 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 SDC2P34741 201 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CRISP3P54108 245 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CMC4P56277 68 aaPredicted RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BDP58876 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BCP62807 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CCL20P78556 96 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST2H2BEQ16778 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 RNASE13Q5GAN3 156 aaKnown RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 SNX29P2Q8IUI4 249 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 RNF175Q8N4F7 328 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 OR4K13Q8NH42 304 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BHQ93079 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BNQ99877 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HIST1H2BMQ99879 126 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CBLN4Q9NTU7 201 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 BAIAP2Q9UQB8 552 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 SZT2Q5T011 3432 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 TNRC6CQ9HCJ0 1690 aaKnown RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 FOCADQ5VW36 1801 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 IGHV5-51A0A0C4DH38 117 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 TRBV7-6A0A0J9YX20 115 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 A0A1B0GW54 56 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 TMEM218A2RU14 115 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 ZNF860A6NHJ4 632 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 A8MWL6 223 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 NCR2O95944 276 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CFC1BP0CG36 223 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 CFC1P0CG37 223 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 ZNF32P17041 273 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 RBM11P57052 281 aaKnown RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 TAS2R45P59539 299 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 MSMO1Q15800 293 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 SP6Q3SY56 376 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 NCMAPQ5T1S8 102 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 RPL22L1Q6P5R6 122 aaKnown RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 MSRB3Q8IXL7 192 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 TMEM256Q8N2U0 113 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 MMGT1Q8N4V1 131 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 PACRGLQ8N7B6 248 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 FER1L6-AS1Q8NA97 138 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 KLHL30-AS1Q8NEE0 82 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 MGLLQ99685 303 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 B9D2Q9BPU9 175 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 HDHD3Q9BSH5 251 aaPredicted RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 RNF11Q9Y3C5 154 aa2.93□□□□□ -1.94
USP44-208ENST00000552440 KDM6AO15550 1401 aaPredicted RBP2.93□□□□□ -1.94
USP44-208ENST00000552440 NHSQ6T4R5 1651 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 CUL9Q8IWT3 2517 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 COL6A3P12111 3177 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 RALGAPA2Q2PPJ7 1873 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 TRPM1Q7Z4N2 1603 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 TRAV30A0A087WSZ9 112 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 IGHV3-49A0A0A0MS15 119 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 IRGMA1A4Y4 181 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 MEIS3P1A6NDR6 274 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 IFITM5A6NNB3 132 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 OR2T1O43869 369 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 PRM2P04554 102 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 IGHV1-8P0DP01 117 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 GNG4P50150 75 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 TMBIM6P55061 237 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 NDUFA6P56556 154 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 BCL2L15Q5TBC7 163 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 SSX8Q7RTT4 187 aa2.92□□□□□ -1.94
USP44-208ENST00000552440 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
USP44-208ENST00000552440 OR5A2Q8NGI9 324 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms