RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NCS1P62166 190 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 DHRS2Q13268 280 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 MEF2DQ14814 521 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 UBE2NLQ5JXB2 153 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 FAAP20Q6NZ36 180 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 CMTM1Q8IZ96 169 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 CSNK1G2-AS1Q8NCQ2 148 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 S100A16Q96FQ6 103 aaKnown RBP4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 RAB40CQ96S21 281 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 MFFQ9GZY8 342 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM30AQ9NZY2 134 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 RAB26Q9ULW5 256 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 TRAV10A0A0B4J240 114 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 F6UB75 175 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 ELK1P19419 428 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 SNCAP37840 140 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 OPRK1P41145 380 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 RANBP1P43487 201 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 CBX5P45973 191 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 TAS2R46P59540 309 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 VBP1P61758 197 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 PAFAH1B2P68402 229 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 ERHP84090 104 aaKnown RBP4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 DHODHQ02127 395 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF600Q6ZNG1 722 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 SLC35G3Q8N808 338 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 DUSP18Q8NEJ0 188 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 LHFPL5Q8TAF8 219 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 GPX8Q8TED1 209 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 DCANP1Q8TF63 244 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 TMEM170AQ8WVE7 144 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 TMEM230Q96A57 120 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 YIPF6Q96EC8 236 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 NAA50Q9GZZ1 169 aaKnown RBP4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 KLK11Q9UBX7 282 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 TBC1D24Q9ULP9 559 aa4.89□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF705EA8MWA4 302 aaPredicted RBP4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 CD3DP04234 171 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 P0C879 139 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 CRYBB3P26998 211 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 NPBWR1P48145 328 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 RND2P52198 227 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 AKR1C2P52895 323 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 PIGPP57054 158 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 NHLH2Q02577 135 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 USF2Q15853 346 aaPredicted RBP4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 IGFL4Q6B9Z1 124 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 THOC7Q6I9Y2 204 aaKnown RBP4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 HSD17B13Q7Z5P4 300 aaPredicted RBP4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 ARRDC1Q8N5I2 433 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF114Q8NC26 417 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 OR52I2Q8NH67 350 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 MARCH1Q8TCQ1 289 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 FCGR1BQ92637 280 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 ACY3Q96HD9 319 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 LINC00052Q96N35 136 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 GINS3Q9BRX5 216 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 WDR12Q9GZL7 423 aaKnown RBP4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 VCX3BQ9H321 246 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 FKBP11Q9NYL4 201 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
PRPF40B-214ENST00000551320 HERC1Q15751 4861 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 A0A0A6YYH2 397 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 HELTA6NFD8 242 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 A6NJ64 397 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM90A26D6RGX4 464 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 CLN5O75503 358 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF705DP0CH99 300 aaPredicted RBP4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 ZNF705BP0CI00 300 aaPredicted RBP4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 FUSP35637 526 aaKnown RBP eCLIP4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 FCN2Q15485 313 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 TRIM16LQ309B1 348 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 SCGB2B2Q4G0G5 96 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 PVRIGQ6DKI7 326 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM219AQ8IW50 185 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 POM121L12Q8N7R1 296 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 OR51G1Q8NGK1 321 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 OR13C8Q8NGS7 320 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 RNASE11Q8TAA1 199 aaKnown RBP4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 GLMPQ8WWB7 406 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 METTL26Q96S19 204 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 NEU1Q99519 415 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 TSC22D3Q99576 134 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 TXN2Q99757 166 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 SLC35B3Q9H1N7 401 aa4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 APOBP04114 4563 aaKnown RBP4.87□□□□□ -1.63
PRPF40B-214ENST00000551320 C3orf85A0A1B0GTC6 90 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM25AB3EWG3 89 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM25CB3EWG5 89 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 FAM25GB3EWG6 89 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 C11orf94C9JXX5 98 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 H3BMM0 161 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 IL4P05112 153 aa4.86□□□□□ -1.63
PRPF40B-214ENST00000551320 FGF2P09038 288 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms