RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TAS2R31P59538 309 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 RND3P61587 244 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 RPL8P62917 257 aaKnown RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 SUPT4H1P63272 117 aaKnown RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 ARL6IP1Q15041 203 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 PLGLAQ15195 96 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 BSXQ3C1V8 233 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 VMA21Q3ZAQ7 101 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 PHLDA2Q53GA4 152 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 GPR107Q5VW38 600 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 ZNF429Q86V71 674 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 SNX29P2Q8IUI4 249 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 FAM223AQ8IWN6 122 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 TMEM61Q8N0U2 210 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 ACOT12Q8WYK0 555 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 SDHCQ99643 169 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 ZNF2Q9BSG1 426 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 ZNF436Q9C0F3 470 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 C5orf66Q9H5L9 145 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 COA4Q9NYJ1 87 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 COMMD3Q9UBI1 195 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 PEF1Q9UBV8 284 aaKnown RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 MTFP1Q9UDX5 166 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 LGALS9O00182 355 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 SCGB1D1O95968 90 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 HPRT1P00492 218 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 RCVRNP35243 200 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 MAS1LP35410 378 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 TALDO1P37837 337 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 LPAR6P43657 344 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 CBX5P45973 191 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 ARPC4P59998 168 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 SNRPEP62304 92 aaKnown RBP3.56□□□□□ -1.84
SCAF11-214ENST00000550893 HAGHQ16775 308 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 DEFB114Q30KQ6 69 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 GTSCR1Q86UQ5 136 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 GDPD1Q8N9F7 314 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 NECAP1Q8NC96 275 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 OR4C16Q8NGL9 310 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 SMIM4Q8WVI0 70 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 ISOC1Q96CN7 298 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 DGCR14Q96DF8 476 aaKnown RBP3.56□□□□□ -1.84
SCAF11-214ENST00000550893 USMG5Q96IX5 58 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 RCHY1Q96PM5 261 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 RTBDNQ9BSG5 229 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-214ENST00000550893 MRPS26Q9BYN8 205 aaKnown RBP3.56□□□□□ -1.84
SCAF11-214ENST00000550893 CCDC59Q9P031 241 aaKnown RBP3.56□□□□□ -1.84
SCAF11-214ENST00000550893 F11RQ9Y624 299 aaKnown RBP3.56□□□□□ -1.84
SCAF11-214ENST00000550893 U3KQK5 164 aa3.56□□□□□ -1.84
SCAF11-214ENST00000550893 IGHV4-4A0A075B6R2 117 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 IGHV3-21A0A0B4J1V1 117 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 IGHV3-35A0A0C4DH35 117 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 A0A0J9YWU9 116 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 INS-IGF2F8WCM5 200 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 H7C423 109 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 GPR31O00270 319 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SLC22A5O76082 557 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 CNIH1O95406 144 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SERPINE2P07093 398 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 CTSGP08311 255 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 RNASE2P10153 161 aaKnown RBP3.55□□□□□ -1.84
SCAF11-214ENST00000550893 FOLR2P14207 255 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 NQO2P16083 231 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 ZP3P21754 424 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 UCP1P25874 307 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 GPR183P32249 361 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 PRSS3P35030 304 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 BTCP35070 178 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 KIR2DS2P43631 304 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 NKX2-1P43699 371 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-214ENST00000550893 PPP5CP53041 499 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 TAS2R46P59540 309 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 TMEM267Q0VDI3 215 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SPINK9Q5DT21 86 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 CLEC19AQ6UXS0 136 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 CROCCP3Q8IVE0 287 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 FAM24BQ8N5W8 94 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 OR5H2Q8NGV7 314 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 OR4A5Q8NH83 315 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 GLYATL2Q8WU03 294 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 S100A16Q96FQ6 103 aaKnown RBP3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SGK494Q96LW2 274 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SPIN2AQ99865 258 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SPIN2BQ9BPZ2 258 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 GPR61Q9BZJ8 451 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 PLEKHA3Q9HB20 300 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 DIABLOQ9NR28 239 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 FAM212BQ9NTI7 297 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-214ENST00000550893 EXTL2Q9UBQ6 330 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 MRPS7Q9Y2R9 242 aaKnown RBP3.55□□□□□ -1.84
SCAF11-214ENST00000550893 SMAD5-AS1Q9Y6J3 95 aa3.55□□□□□ -1.84
SCAF11-214ENST00000550893 KIAA1109Q2LD37 5005 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 HSPG2P98160 4391 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 A0A0G2JLM5 398 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 C13orf42A0A1B0GVH6 325 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 ANKRD20A5PA0PJZ0 165 aa3.54□□□□□ -1.84
SCAF11-214ENST00000550893 PGPEP1LA6NFU8 196 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms