RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 A0A0B4J2E0 115 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 ANKRD20A5PA0PJZ0 165 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 FTCDNL1E5RQL4 147 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 HMGN4O00479 90 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 PHOX2AO14813 284 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 CCL25O15444 150 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 SLC16A7O60669 478 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 MT-CO2P00403 227 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 BGLAPP02818 100 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 BCHEP06276 602 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 CST2P09228 141 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 ZNF35P13682 527 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 FUT3P21217 361 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 S100A7P31151 101 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 PFN2P35080 140 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 LGALS7P47929 136 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 POLR2HP52434 150 aaKnown RBP4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 FAM3AP98173 230 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 AESQ08117 197 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 HERPUD1Q15011 391 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 TAL2Q16559 108 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 MORN2Q502X0 79 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 TMEM255AQ5JRV8 349 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 C1orf194Q5T5A4 169 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 IDNKQ5T6J7 187 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 TNFAIP8L2Q6P589 184 aaPredicted RBP4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 SMARCD3Q6STE5 483 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 EPGNQ6UW88 154 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 DRAM2Q6UX65 266 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 ZCCHC23Q6ZST2 131 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 DDIT4LQ96D03 193 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 SLC35G5Q96KT7 338 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 TP53RKQ96S44 253 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 RSPO3Q9BXY4 272 aaPredicted RBP4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 C1orf198Q9H425 327 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 CST9LQ9H4G1 147 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 DYNLRB1Q9NP97 96 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 OR2S2Q9NQN1 319 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 SLC25A37Q9NYZ2 338 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 MTFP1Q9UDX5 166 aa4.29□□□□□ -1.72
TGFBR1-208ENST00000550253 COL7A1Q02388 2944 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 TVP23AA6NH52 213 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 MCRIP1C9JLW8 97 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 RNASEK-C17orf49H0YIS7 233 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 MAGEB4O15481 346 aaPredicted RBP4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 ADAP1O75689 374 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 CD79AP11912 226 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 RPS4Y1P22090 263 aaKnown RBP4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 S100GP29377 79 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 INPP1P49441 399 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 UBE2NP61088 152 aaKnown RBP4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 RPL31P62899 125 aaKnown RBP4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 RPL18AQ02543 176 aaKnown RBP4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 TPBGQ13641 420 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 ZNF266Q14584 549 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 IQCJQ1A5X6 159 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 CEACAM16Q2WEN9 425 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 FAHD1Q6P587 224 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 FAM131AQ6UXB0 335 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 ZNF584Q8IVC4 421 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 HIST3H2BBQ8N257 126 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 Q8N402 240 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 SPICQ8N5J4 248 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 SIGLECL1Q8N7X8 197 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 ZNF738Q8NE65 137 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 OR4S1Q8NGB4 309 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 OR11H7Q8NGC8 314 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 CANT1Q8WVQ1 401 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 TMEM239Q8WW34 195 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 RDH5Q92781 318 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 GALNT14Q96FL9 552 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 REEP6Q96HR9 211 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 SLC35E1Q96K37 410 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 TEX37Q96LM6 180 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 PBDC1Q9BVG4 233 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 LINC00470Q9BZP3 86 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 WFDC1Q9HC57 220 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 OR51B2Q9Y5P1 312 aa4.28□□□□□ -1.72
TGFBR1-208ENST00000550253 CORTO00230 105 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 SNAI2O43623 268 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 MPZL1O95297 269 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 CD37P11049 281 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 MDKP21741 143 aaPredicted RBP4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 CXCR1P25024 350 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 PSMA1P25786 263 aaKnown RBP4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 FKBP2P26885 142 aaKnown RBP4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 CTRLP40313 264 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 CLDN12P56749 244 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 KRTAP10-3P60369 221 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 CCL8P80075 99 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 HOXC5Q00444 222 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 SLC36A2Q495M3 483 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 SPRNQ5BIV9 151 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 MRPL2Q5T653 305 aaKnown RBP4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 C1orf140Q5VVS0 124 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 ALKAL2Q6UX46 152 aa4.27□□□□□ -1.73
TGFBR1-208ENST00000550253 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms