RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 LGI3Q8N145 548 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 TOMM5Q8N4H5 51 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 OR1S2Q8NGQ3 325 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 TMEM170AQ8WVE7 144 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 CSTL1Q9H114 145 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 HSPB7Q9UBY9 170 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 U3KQ87 197 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 V9GYH0 126 aa13.76□□□□□ -0.21
CHMP1A-203ENST00000547614 STARD9Q9P2P6 4700 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 IGHV3-66A0A0C4DH42 116 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 CCDC160A6NGH7 325 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 IGLC1P0CG04 106 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 NPY1RP25929 384 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 RND2P52198 227 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 YPEL3P61236 119 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 RPL11P62913 178 aaKnown RBP13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 TIGITQ495A1 244 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 TMEM128Q5BJH2 165 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 LYZL2Q7Z4W2 148 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 NARS2Q96I59 477 aaKnown RBP13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 PRR13Q9NZ81 148 aa13.75□□□□□ -0.21
CHMP1A-203ENST00000547614 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 JTBO76095 146 aa13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 ATF4P18848 351 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 ZNF124Q15973 351 aa13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 LYG2Q86SG7 212 aa13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 Q8WTZ3 238 aa13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-203ENST00000547614 A0A0J9YWU9 116 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 DUXBA0A1W2PPF3 345 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 ZNF701M0R085 212 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 IFNA10P01566 189 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 OR10J1P30954 320 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 P2RY1P47900 373 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 ZNF79Q15937 498 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 CCDC190Q86UF4 302 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 DTD1Q8TEA8 209 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 GRAMD2BQ96HH9 432 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 RBM38Q9H0Z9 239 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 U3KQE9 123 aa13.73□□□□□ -0.21
CHMP1A-203ENST00000547614 NXPH3O95157 252 aa13.72□□□□□ -0.21
CHMP1A-203ENST00000547614 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
CHMP1A-203ENST00000547614 RBKSQ9H477 322 aa13.72□□□□□ -0.21
CHMP1A-203ENST00000547614 RABAC1Q9UI14 185 aa13.72□□□□□ -0.21
CHMP1A-203ENST00000547614 SACSQ9NZJ4 4579 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 K7EQG2 157 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 EIF2B2P49770 351 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 DEFB131AP59861 70 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 RBMS2Q15434 407 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 TMED4Q7Z7H5 227 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 TMEM217Q8N7C4 229 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 NPIPB3Q92617 1050 aa13.71□□□□□ -0.21
CHMP1A-203ENST00000547614 PITX3O75364 302 aa13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 SLC25A6P12236 298 aa13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 AP2S1P53680 142 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 SPANXN2Q5MJ10 180 aa13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 OR1S1Q8NH92 325 aa13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
CHMP1A-203ENST00000547614 HELTA6NFD8 242 aa13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 TOMM40O96008 361 aa13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 HNRNPCP07910 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 RD3LP0DJH9 198 aa13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 C16orf54Q6UWD8 224 aa13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 FAM24BQ8N5W8 94 aa13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 DCANP1Q8TF63 244 aa13.69□□□□□ -0.22
CHMP1A-203ENST00000547614 FAM90A26D6RGX4 464 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 IFNA4P05014 189 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 IL4P05112 153 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 VAMP1P23763 118 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 GPX4P36969 197 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 EWSR1Q01844 656 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 LEMD1Q68G75 181 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 RARRES2Q99969 163 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 TMED3Q9Y3Q3 217 aa13.68□□□□□ -0.22
CHMP1A-203ENST00000547614 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
CHMP1A-203ENST00000547614 NUPR2A6NF83 97 aa13.67□□□□□ -0.22
CHMP1A-203ENST00000547614 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-203ENST00000547614 STHQ8IWL8 128 aa13.67□□□□□ -0.22
CHMP1A-203ENST00000547614 LYSTQ99698 3801 aa13.67□□□□□ -0.22
CHMP1A-203ENST00000547614 SFT2D2O95562 160 aa13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 CA1P00915 261 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 PSG1P11464 419 aa13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 UBE2MP61081 183 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 CENPSQ8N2Z9 138 aa13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 SRRQ9GZT4 340 aa13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 RYR2Q92736 4967 aa13.66□□□□□ -0.22
CHMP1A-203ENST00000547614 BUB3O43684 328 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 MED6O75586 246 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 RAB11AP62491 216 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 DHRS2Q13268 280 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 PPP1R1AQ13522 171 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 GAMTQ14353 236 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
CHMP1A-203ENST00000547614 CEMP1Q6PRD7 247 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms