RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
TROAP-203ENST00000546735 PRSS54Q6PEW0 395 aa10.43□□□□□ -0.74
TROAP-203ENST00000546735 CLVS1Q8IUQ0 354 aaPredicted RBP10.43□□□□□ -0.74
TROAP-203ENST00000546735 DIRAS2Q96HU8 199 aa10.43□□□□□ -0.74
TROAP-203ENST00000546735 MRPS26Q9BYN8 205 aaKnown RBP10.43□□□□□ -0.74
TROAP-203ENST00000546735 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 RPS10-NUDT3A0A1W2PQS6 291 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 C4BPBP20851 252 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 SURF2Q15527 256 aaPredicted RBP10.42□□□□□ -0.74
TROAP-203ENST00000546735 TRPT1Q86TN4 253 aaKnown RBP10.42□□□□□ -0.74
TROAP-203ENST00000546735 SLC24A4Q8NFF2 622 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 OR51S1Q8NGJ8 323 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 OR1S2Q8NGQ3 325 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 Q8WTZ3 238 aa10.42□□□□□ -0.74
TROAP-203ENST00000546735 VPS13DQ5THJ4 4388 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 IFNA4P05014 189 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 OR10J1P30954 320 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 DHRS2Q13268 280 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 USF2Q15853 346 aaPredicted RBP10.41□□□□□ -0.74
TROAP-203ENST00000546735 ACTL10Q5JWF8 245 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 ACY3Q96HD9 319 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 GRAMD2BQ96HH9 432 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
TROAP-203ENST00000546735 MFFQ9GZY8 342 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 TMEM56-RWDD3S4R434 201 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 U3KQE9 123 aa10.41□□□□□ -0.74
TROAP-203ENST00000546735 IGHV4-28A0A0C4DH34 117 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 CTDSPLO15194 276 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 HNRNPCP07910 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
TROAP-203ENST00000546735 RBMY1A1P0DJD3 496 aaKnown RBP10.4□□□□□ -0.74
TROAP-203ENST00000546735 RBMY1CP0DJD4 496 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 NPY1RP25929 384 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 RBMY1FQ15415 496 aaKnown RBP10.4□□□□□ -0.74
TROAP-203ENST00000546735 LGALS9CQ6DKI2 356 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 C16orf54Q6UWD8 224 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 Q8NAQ8 132 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 DYNC2LI1Q8TCX1 351 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 RNASEH2CQ8TDP1 164 aaKnown RBP10.4□□□□□ -0.74
TROAP-203ENST00000546735 GLMPQ8WWB7 406 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 NPIPB3Q92617 1050 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 PRRT1Q99946 306 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 CLEC5AQ9NY25 188 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.74
TROAP-203ENST00000546735 ANKRD20A5PA0PJZ0 165 aa10.39□□□□□ -0.75
TROAP-203ENST00000546735 IL4P05112 153 aa10.39□□□□□ -0.75
TROAP-203ENST00000546735 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
TROAP-203ENST00000546735 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
TROAP-203ENST00000546735 SLC25A4P12235 298 aa10.39□□□□□ -0.75
TROAP-203ENST00000546735 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
TROAP-203ENST00000546735 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
TROAP-203ENST00000546735 HELTA6NFD8 242 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 IFNA10P01566 189 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 AKR1C4P17516 323 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 PRR20EP86478 221 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 PRR20CP86479 221 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 PRR20DP86480 221 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 PRR20BP86481 221 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 PRR20AP86496 221 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 MORN3Q6PF18 240 aaPredicted RBP10.38□□□□□ -0.75
TROAP-203ENST00000546735 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 C2CD4CQ8TF44 421 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 RAB40CQ96S21 281 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 RBKSQ9H477 322 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 MCUBQ9NWR8 336 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 CCDC59Q9P031 241 aaKnown RBP10.38□□□□□ -0.75
TROAP-203ENST00000546735 KCNIP3Q9Y2W7 256 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 X6R8D5 127 aa10.38□□□□□ -0.75
TROAP-203ENST00000546735 IGLL5B9A064 214 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 GSTZ1O43708 216 aaPredicted RBP10.37□□□□□ -0.75
TROAP-203ENST00000546735 TOMM40O96008 361 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 RD3LP0DJH9 198 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 SPP1P10451 314 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
TROAP-203ENST00000546735 SUPT4H1P63272 117 aaKnown RBP10.37□□□□□ -0.75
TROAP-203ENST00000546735 NMSQ5H8A3 153 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 DTD1Q8TEA8 209 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 RAB2BQ8WUD1 216 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 IL22RA2Q969J5 263 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 SCP2D1Q9UJQ7 156 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 AGRNO00468 2067 aa10.37□□□□□ -0.75
TROAP-203ENST00000546735 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
TROAP-203ENST00000546735 ZNF705EA8MWA4 302 aaPredicted RBP10.36□□□□□ -0.75
TROAP-203ENST00000546735 FAM90A26D6RGX4 464 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 BUB3O43684 328 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 PSG1P11464 419 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 HLA-DMBP28068 263 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 CCR6P51684 374 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 AP2S1P53680 142 aaPredicted RBP10.36□□□□□ -0.75
TROAP-203ENST00000546735 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 OR51G1Q8NGK1 321 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 SLIRPQ9GZT3 109 aaKnown RBP10.36□□□□□ -0.75
TROAP-203ENST00000546735 RABL2AQ9UBK7 228 aaPredicted RBP10.36□□□□□ -0.75
TROAP-203ENST00000546735 HSPB7Q9UBY9 170 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 APLNQ9ULZ1 77 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 RABL2BQ9UNT1 228 aa10.36□□□□□ -0.75
TROAP-203ENST00000546735 A0A0B4J2A0 478 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms