RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 DEFB131AP59861 70 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.3
YBX3-218ENST00000546298 PMS2P11Q13670 270 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 MLANAQ16655 118 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 TIGITQ495A1 244 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 PRSS54Q6PEW0 395 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.3
YBX3-218ENST00000546298 LILRB2Q8N423 598 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 MCFD2Q8NI22 146 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 LHFPL5Q8TAF8 219 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 RARRES2Q99969 163 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 SHPKQ9UHJ6 478 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 HELTA6NFD8 242 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 IFNA10P01566 189 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 IGLC1P0CG04 106 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 AKR1C4P17516 323 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 NPY1RP25929 384 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 OR10J1P30954 320 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 P2RY1P47900 373 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 RND2P52198 227 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 TMEM187Q14656 261 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 ZNF124Q15973 351 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 STHQ8IWL8 128 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 LGI3Q8N145 548 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 STXBP6Q8NFX7 210 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 SOSTQ9BQB4 213 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
YBX3-218ENST00000546298 MFFQ9GZY8 342 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 MRPL36Q9P0J6 103 aaKnown RBP6.89□□□□□ -1.31
YBX3-218ENST00000546298 PFDN2Q9UHV9 154 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 U3KQ87 197 aa6.89□□□□□ -1.31
YBX3-218ENST00000546298 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
YBX3-218ENST00000546298 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 H3BMQ9 156 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 K7EQG2 157 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
YBX3-218ENST00000546298 HNRNPCP07910 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
YBX3-218ENST00000546298 NUP62P37198 522 aaPredicted RBP6.88□□□□□ -1.31
YBX3-218ENST00000546298 SMCO1Q147U7 214 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 NMSQ5H8A3 153 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 OR11H2Q8NH07 326 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
YBX3-218ENST00000546298 DUXBA0A1W2PPF3 345 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 IFNA4P05014 189 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 FABP1P07148 127 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 RD3LP0DJH9 198 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 SPP1P10451 314 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 S100A5P33763 92 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 RBMS2Q15434 407 aaKnown RBP6.87□□□□□ -1.31
YBX3-218ENST00000546298 PYDC2Q56P42 97 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 LEMD1Q68G75 181 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 MORN3Q6PF18 240 aaPredicted RBP6.87□□□□□ -1.31
YBX3-218ENST00000546298 TOMM5Q8N4H5 51 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 OR1S1Q8NH92 325 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 C11orf45Q8TAV5 145 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 DTD1Q8TEA8 209 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 DEDD2Q8WXF8 326 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 NPIPB3Q92617 1050 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 ACY3Q96HD9 319 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 C11orf68Q9H3H3 251 aaKnown RBP6.87□□□□□ -1.31
YBX3-218ENST00000546298 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 U3KQE9 123 aa6.87□□□□□ -1.31
YBX3-218ENST00000546298 CCDC160A6NGH7 325 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 NXPH3O95157 252 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 LY6G6CO95867 125 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 TOMM40O96008 361 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 IL4P05112 153 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 ZNF688P0C7X2 276 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 GPX4P36969 197 aaPredicted RBP6.86□□□□□ -1.31
YBX3-218ENST00000546298 SNRPD3P62318 126 aaKnown RBP6.86□□□□□ -1.31
YBX3-218ENST00000546298 EWSR1Q01844 656 aaKnown RBP eCLIP6.86□□□□□ -1.31
YBX3-218ENST00000546298 DHRS2Q13268 280 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 KLF9Q13886 244 aaPredicted RBP6.86□□□□□ -1.31
YBX3-218ENST00000546298 TMEM128Q5BJH2 165 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 C16orf54Q6UWD8 224 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 LYZL2Q7Z4W2 148 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
YBX3-218ENST00000546298 SLC35E1Q96K37 410 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 SLC25A21Q9BQT8 299 aaPredicted RBP6.86□□□□□ -1.31
YBX3-218ENST00000546298 RBKSQ9H477 322 aa6.86□□□□□ -1.31
YBX3-218ENST00000546298 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
YBX3-218ENST00000546298 ZFP92A6NM28 416 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 MED6O75586 246 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 PSG1P11464 419 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 NUTF2P61970 127 aaKnown RBP6.85□□□□□ -1.31
YBX3-218ENST00000546298 RAB11AP62491 216 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 SUPT4H1P63272 117 aaKnown RBP6.85□□□□□ -1.31
YBX3-218ENST00000546298 RPP30P78346 268 aaKnown RBP6.85□□□□□ -1.31
YBX3-218ENST00000546298 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 TRPT1Q86TN4 253 aaKnown RBP6.85□□□□□ -1.31
YBX3-218ENST00000546298 CENPSQ8N2Z9 138 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 FAM24BQ8N5W8 94 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 OR51G1Q8NGK1 321 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 DCANP1Q8TF63 244 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 TMEM170AQ8WVE7 144 aa6.85□□□□□ -1.31
YBX3-218ENST00000546298 GLMPQ8WWB7 406 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms