RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 OR51H1Q8NH63 302 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 OR4A16Q8NH70 328 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 MAP1LC3CQ9BXW4 147 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 HES7Q9BYE0 225 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 NPFFR1Q9GZQ6 430 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 ZNF331Q9NQX6 463 aaPredicted RBP4.32□□□□□ -1.72
USP28-213ENST00000544967 TNFRSF19Q9NS68 423 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 TENM4Q6N022 2769 aa4.32□□□□□ -1.72
USP28-213ENST00000544967 MUC21A0A0G2JKD1 596 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 MUC21A0A140T8X8 626 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 C7orf71A4D174 169 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ANKRD30BLA7E2S9 258 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ANGPTL7O43827 346 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 SCTP09683 121 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 RFPL3SP0C7P2 107 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 GLI4P10075 376 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 GCHFRP30047 84 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ERVK11-1P61568 191 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 RPL31P62899 125 aaKnown RBP4.31□□□□□ -1.72
USP28-213ENST00000544967 HSD52Q0P140 79 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 TIGITQ495A1 244 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 CD300EQ496F6 205 aaPredicted RBP4.31□□□□□ -1.72
USP28-213ENST00000544967 MUC21Q5SSG8 566 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 WDR82Q6UXN9 313 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR8I2Q8N0Y5 310 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR4X2Q8NGF9 303 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 NEUROG1Q92886 237 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 CCDC140Q96MF4 163 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 WNT10AQ9GZT5 417 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 B4GALT7Q9UBV7 327 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 LOC102724200A0A096LPH7 203 aaPredicted RBP4.31□□□□□ -1.72
USP28-213ENST00000544967 SCO2A0A1W2PP80 73 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR11H12B2RN74 326 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 GNG4P50150 75 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 PCBD1P61457 104 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 SSBP2P81877 361 aaPredicted RBP4.31□□□□□ -1.72
USP28-213ENST00000544967 TLE1Q04724 770 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 TFF3Q07654 80 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 LY6DQ14210 128 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 TMEM97Q5BJF2 176 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 SEM1Q6ZVN7 128 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 GATD1Q8NB37 220 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR11H1Q8NG94 326 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR2Z1Q8NG97 314 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR1L4Q8NGR5 311 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR11H2Q8NH07 326 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR1L1Q8NH94 360 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR1F12Q8NHA8 337 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 VSTM2AQ8TAG5 236 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 H1FXQ92522 213 aaKnown RBP4.31□□□□□ -1.72
USP28-213ENST00000544967 MRAP2Q96G30 205 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 AP1S3Q96PC3 154 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 VKORC1Q9BQB6 163 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 DERL1Q9BUN8 251 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR2D2Q9H210 308 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 HSPB8Q9UJY1 196 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 FAM215AQ9Y5M1 114 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ACACBO00763 2458 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 A0A1B0GXF2 115 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 A0A1W2PRE2 83 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ODAMA1E959 279 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 FAM231BA6NCW3 169 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 PRSS29PA6NIE9 313 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 NBR2O15453 112 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 EFNA2O43921 213 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ZNF205O95201 554 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 WISP1O95388 367 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 RELBQ01201 579 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 CATR1Q13166 79 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 ZDHHC23Q8IYP9 409 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 FGFRL1Q8N441 504 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 OR2K2Q8NGT1 345 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 SARAFQ96BY9 339 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 IGF2BP2-AS1Q96M15 143 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 EMC6Q9BV81 110 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
USP28-213ENST00000544967 SEC16AO15027 2179 aa4.31□□□□□ -1.72
USP28-213ENST00000544967 A0A1W2PR80 420 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 PRSS46E5RG02 174 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 FCGR3BO75015 233 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 SS18L1O75177 396 aaPredicted RBP4.3□□□□□ -1.72
USP28-213ENST00000544967 IGHG4P01861 327 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 ARL14EPLP0DKL9 152 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 CDAP32320 146 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 KIR2DL2P43627 348 aaPredicted RBP4.3□□□□□ -1.72
USP28-213ENST00000544967 KIAA2026Q5HYC2 2103 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 Q6ZVH6 145 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 FAM214BQ7L5A3 538 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 ZNF611Q8N823 705 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 C8orf46Q8TAG6 207 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 DNAJA3Q96EY1 480 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 C1QTNF5Q9BXJ0 243 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 MBNL3Q9NUK0 354 aaKnown RBP4.3□□□□□ -1.72
USP28-213ENST00000544967 RABAC1Q9UI14 185 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 DOCK7Q96N67 2140 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 TRGV8A0A0C4DH27 118 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 C5orf63A6NC05 138 aa4.3□□□□□ -1.72
USP28-213ENST00000544967 F5H5K5 113 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms