RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 CORTO00230 105 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 RAB2AP61019 212 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 KLK9Q2XQG4 91 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 ACY3Q96HD9 319 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 SLC35E1Q96K37 410 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 KCNIP2Q9NS61 270 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 FBXL7Q9UJT9 491 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 KLK9Q9UKQ9 250 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 KRBOX1C9JBD0 128 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 F8W735 103 aaPredicted RBP12.42□□□□□ -0.42
XRCC1-202ENST00000543982 HBE1P02100 147 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 M6PRP20645 277 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 ZNF726P1Q15940 193 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 ACOT6Q3I5F7 207 aaPredicted RBP12.42□□□□□ -0.42
XRCC1-202ENST00000543982 ETFRF1Q6IPR1 90 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 MBD3L1Q8WWY6 194 aa12.42□□□□□ -0.42
XRCC1-202ENST00000543982 RCC1LQ96I51 464 aaKnown RBP12.42□□□□□ -0.42
XRCC1-202ENST00000543982 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 RPL29P47914 159 aaKnown RBP12.41□□□□□ -0.42
XRCC1-202ENST00000543982 RND2P52198 227 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 RHOGP84095 191 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 SRSF3P84103 164 aaKnown RBP12.41□□□□□ -0.42
XRCC1-202ENST00000543982 TMEM68Q96MH6 324 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 PXMP4Q9Y6I8 212 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 A0A1B0GV50 99 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 ZP3P21754 424 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 BPIFCQ8NFQ6 507 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 SLC39A9Q9NUM3 307 aa12.41□□□□□ -0.42
XRCC1-202ENST00000543982 CYB5BO43169 146 aa12.4□□□□□ -0.42
XRCC1-202ENST00000543982 GATA2P23769 480 aaPredicted RBP12.4□□□□□ -0.42
XRCC1-202ENST00000543982 CCL20P78556 96 aa12.4□□□□□ -0.42
XRCC1-202ENST00000543982 MIC13Q5XKP0 118 aa12.4□□□□□ -0.42
XRCC1-202ENST00000543982 OR1L6Q8NGR2 347 aa12.4□□□□□ -0.42
XRCC1-202ENST00000543982 LINC00052Q96N35 136 aa12.4□□□□□ -0.42
XRCC1-202ENST00000543982 TSPAN9O75954 239 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 CD5P06127 495 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 B2MP61769 119 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 PRR20EP86478 221 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 PRR20CP86479 221 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 PRR20DP86480 221 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 PRR20BP86481 221 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 PRR20AP86496 221 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 C15orf32Q32M92 178 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 LCN15Q6UWW0 184 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 SSX7Q7RTT5 188 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
XRCC1-202ENST00000543982 ACTR3CQ9C0K3 210 aaPredicted RBP12.39□□□□□ -0.43
XRCC1-202ENST00000543982 SLC45A2Q9UMX9 530 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 JMJD1CQ15652 2540 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
XRCC1-202ENST00000543982 YIF1AO95070 293 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 ZNF90Q03938 601 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 KIAA0141Q14154 515 aaPredicted RBP12.39□□□□□ -0.43
XRCC1-202ENST00000543982 STPG3Q8N7X2 389 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 TMEM116Q8NCL8 245 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 ZNF414Q96IQ9 312 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 SCRT1Q9BWW7 348 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 TREM1Q9NP99 234 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 ZNF580Q9UK33 172 aa12.39□□□□□ -0.43
XRCC1-202ENST00000543982 CTXND1A0A1B0GTU2 59 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 TMEM218A2RU14 115 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 OR10J1P30954 320 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 GUK1Q16774 197 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 EIF5A2Q9GZV4 153 aaKnown RBP12.38□□□□□ -0.43
XRCC1-202ENST00000543982 SEC14L6B5MCN3 397 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 EIF3GO75821 320 aaKnown RBP eCLIP12.38□□□□□ -0.43
XRCC1-202ENST00000543982 IGHG4P01861 327 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 TRGV3P03979 118 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 PF4V1P10720 104 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 PSMB8P28062 276 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 GCSAMLQ5JQS6 135 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 FAM122CQ6P4D5 195 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 RAB24Q969Q5 203 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
XRCC1-202ENST00000543982 IGKV1-17P01599 117 aa12.37□□□□□ -0.43
XRCC1-202ENST00000543982 LINC00869P0C866 280 aa12.37□□□□□ -0.43
XRCC1-202ENST00000543982 RAB9AP51151 201 aa12.37□□□□□ -0.43
XRCC1-202ENST00000543982 PEA15Q15121 130 aa12.37□□□□□ -0.43
XRCC1-202ENST00000543982 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
XRCC1-202ENST00000543982 OR4X1Q8NH49 305 aa12.37□□□□□ -0.43
XRCC1-202ENST00000543982 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
XRCC1-202ENST00000543982 TCF21O43680 179 aa12.36□□□□□ -0.43
XRCC1-202ENST00000543982 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
XRCC1-202ENST00000543982 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
XRCC1-202ENST00000543982 FGF8P55075 233 aaPredicted RBP12.36□□□□□ -0.43
XRCC1-202ENST00000543982 TPPP2P59282 170 aa12.36□□□□□ -0.43
XRCC1-202ENST00000543982 TIGITQ495A1 244 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms