RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ZNF705DP0CH99 300 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 ZNF705BP0CI00 300 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 SOHLH1Q5JUK2 328 aa14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 UBE2DNLQ8IWF7 75 aa14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 OR1S2Q8NGQ3 325 aa14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 ZNF486Q96H40 463 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 TP53RKQ96S44 253 aa14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 SMIM9A6NGZ8 99 aa14.22□□□□□ -0.13
LPCAT3-210ENST00000540090 RCVRNP35243 200 aa14.22□□□□□ -0.13
LPCAT3-210ENST00000540090 YPEL3P61236 119 aaPredicted RBP14.22□□□□□ -0.13
LPCAT3-210ENST00000540090 NEDD8Q15843 81 aa14.22□□□□□ -0.13
LPCAT3-210ENST00000540090 RNF212Q495C1 297 aa14.22□□□□□ -0.13
LPCAT3-210ENST00000540090 NRN1Q9NPD7 142 aa14.22□□□□□ -0.13
LPCAT3-210ENST00000540090 RPS10-NUDT3A0A1W2PQS6 291 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 HLA-DRB4P13762 266 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 PGAM2P15259 253 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 PI3P19957 117 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 EMP1P54849 157 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 PIGPP57054 158 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 DHODHQ02127 395 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 PRSS54Q6PEW0 395 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 DKK2Q9UBU2 259 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 HLA-DRB4X5D2U9 266 aa14.21□□□□□ -0.13
LPCAT3-210ENST00000540090 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 C3orf85A0A1B0GTC6 90 aa14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 SMIM31A0A1B0GVY4 71 aa14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 BUB3O43684 328 aa14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 USF2Q15853 346 aaPredicted RBP14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 LHFPL1Q86WI0 220 aa14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 Q9H521 79 aa14.2□□□□□ -0.14
LPCAT3-210ENST00000540090 M0QYG6 137 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 SLC25A4P12235 298 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 OR10J1P30954 320 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 HTR2BP41595 481 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 NKX2-1P43699 371 aaPredicted RBP14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 RND2P52198 227 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 SPCS3P61009 180 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 AARDQ4LEZ3 155 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 C1orf134Q5TEV5 83 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 SNX29P2Q8IUI4 249 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 RRNAD1Q96FB5 475 aaKnown RBP14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 NIPSNAP3BQ9BS92 247 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 RFNGQ9Y644 331 aa14.19□□□□□ -0.14
LPCAT3-210ENST00000540090 TEX48A0A1B0GUV7 120 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 APOA1P02647 267 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 IL4P05112 153 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 TRIM16LQ309B1 348 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 SP6Q3SY56 376 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 SIGLEC15Q6ZMC9 328 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 OR52E5Q8NH55 327 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 PLA2G2EQ9NZK7 142 aa14.18□□□□□ -0.14
LPCAT3-210ENST00000540090 UCP1P25874 307 aa14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 OXA1LQ15070 435 aa14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 C2orf83Q53S99 150 aa14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 GDF5OSQ5U4N7 250 aa14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 FAM222AQ5U5X8 452 aa14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 RNASEH2CQ8TDP1 164 aaKnown RBP14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 COMMD3Q9UBI1 195 aa14.17□□□□□ -0.14
LPCAT3-210ENST00000540090 IGHV3OR16-12A0A075B7B8 117 aa14.16□□□□□ -0.14
LPCAT3-210ENST00000540090 GSTZ1O43708 216 aaPredicted RBP14.16□□□□□ -0.14
LPCAT3-210ENST00000540090 FXYD7P58549 80 aa14.16□□□□□ -0.14
LPCAT3-210ENST00000540090 CLUHP3Q96NS8 147 aa14.16□□□□□ -0.14
LPCAT3-210ENST00000540090 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.16□□□□□ -0.14
LPCAT3-210ENST00000540090 NXPH3O95157 252 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 TOMM40O96008 361 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 IGKV3-20P01619 116 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 RD3LP0DJH9 198 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 DEFB1P60022 68 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 LSM3P62310 102 aaKnown RBP14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 ARRDC1Q8N5I2 433 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 HEYLQ9NQ87 328 aaPredicted RBP14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 COPZ2Q9P299 210 aa14.15□□□□□ -0.14
LPCAT3-210ENST00000540090 B3GALNT1O75752 331 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 CDK2AP2O75956 126 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 RNASE10Q5GAN6 216 aaKnown RBP14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 FAM219AQ8IW50 185 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 ZNF709Q8N972 641 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 RNASE11Q8TAA1 199 aaKnown RBP14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 TMEM170AQ8WVE7 144 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 NPIPB3Q92617 1050 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 YIPF6Q96EC8 236 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 SAV1Q9H4B6 383 aaPredicted RBP14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 KLK11Q9UBX7 282 aa14.14□□□□□ -0.15
LPCAT3-210ENST00000540090 CDS2O95674 445 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 HTN3P15516 51 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 ELK1P19419 428 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 ETFRF1Q6IPR1 90 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 FOXI2Q6ZQN5 318 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 CCDC71LQ8N9Z2 235 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 SLC24A4Q8NFF2 622 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 ZFAND1Q8TCF1 268 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 APOBP04114 4563 aaKnown RBP14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 DNAH5Q8TE73 4624 aa14.13□□□□□ -0.15
LPCAT3-210ENST00000540090 C16orf90A8MZG2 172 aa14.12□□□□□ -0.15
LPCAT3-210ENST00000540090 CD3DP04234 171 aa14.12□□□□□ -0.15
LPCAT3-210ENST00000540090 PSG1P11464 419 aa14.12□□□□□ -0.15
LPCAT3-210ENST00000540090 FAM3BP58499 235 aaPredicted RBP14.12□□□□□ -0.15
LPCAT3-210ENST00000540090 TMEM88Q6PEY1 159 aa14.12□□□□□ -0.15
LPCAT3-210ENST00000540090 TERB2Q8NHR7 220 aa14.12□□□□□ -0.15
LPCAT3-210ENST00000540090 LINC00052Q96N35 136 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms