RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FAM168AQ92567 244 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 FOXA2Q9Y261 457 aaPredicted RBP13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 IGHV1-3A0A0C4DH29 117 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 A0A1W2PRD5 423 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 A0A1W2PRF3 423 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 A0A1W2PRM7 423 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 MPDU1O75352 247 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 ARL14EPLP0DKL9 152 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 OPRK1P41145 380 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 PDLIM3Q53GG5 364 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 VMO1Q7Z5L0 202 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 OR11H6Q8NGC7 330 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 LY6LH3BQJ8 138 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 MC5RP33032 325 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 VDAC2P45880 294 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 HSPE1P61604 102 aaKnown RBP13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 TREML4Q6UXN2 200 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 MOB3BQ86TA1 216 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 RPEQ96AT9 228 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 PERPQ96FX8 193 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 C20orf144Q9BQM9 153 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 TXNDC17Q9BRA2 123 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 BET1LQ9NYM9 111 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 OR51B2Q9Y5P1 312 aa13.72□□□□□ -0.21
PCDHB17P-201ENST00000539533 TENM4Q6N022 2769 aa13.71□□□□□ -0.21
PCDHB17P-201ENST00000539533 ADMP35318 185 aa13.71□□□□□ -0.21
PCDHB17P-201ENST00000539533 HEYLQ9NQ87 328 aaPredicted RBP13.71□□□□□ -0.21
PCDHB17P-201ENST00000539533 AMMECR1Q9Y4X0 333 aaPredicted RBP13.71□□□□□ -0.21
PCDHB17P-201ENST00000539533 USP9YO00507 2555 aaPredicted RBP13.71□□□□□ -0.21
PCDHB17P-201ENST00000539533 SCO2A0A1W2PP80 73 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 IGLV2-23P01705 113 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 STAG3L2P0CL84 134 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 STAG3L3P0CL85 134 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 YPEL3P61236 119 aaPredicted RBP13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 RPP30P78346 268 aaKnown RBP13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 C1orf122Q6ZSJ8 110 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 C10orf105Q8TEF2 133 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 MGST2Q99735 147 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 HINT2Q9BX68 163 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 PAM16Q9Y3D7 125 aa13.71□□□□□ -0.22
PCDHB17P-201ENST00000539533 IGHV2-70DA0A0C4DH43 119 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 CXorf1O96002 111 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 OR5I1Q13606 314 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 TEX43Q6ZNM6 134 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 LHFPL4Q7Z7J7 247 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 PIMREGQ9BSJ6 248 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 GGTLC1Q9BX51 225 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 PRNDQ9UKY0 176 aa13.7□□□□□ -0.22
PCDHB17P-201ENST00000539533 IGHV4-61A0A0C4DH41 118 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 GRIFINA4D1Z8 144 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 RRHO14718 337 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 HNF1AP20823 631 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 HTR1DP28221 377 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 MIC13Q5XKP0 118 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 Q6ZWC4 215 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 KIR3DL3Q8N743 410 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 OR10G8Q8NGN5 311 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 SIRPDQ9H106 197 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 HILPDAQ9Y5L2 63 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 ODF3BA8MYP8 253 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 TPTE2P1Q5T6R2 138 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 CLEC2AQ6UVW9 174 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 OCC1Q8TAD7 63 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
PCDHB17P-201ENST00000539533 IGHV4-30-2A0A087WSY4 118 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 SLC25A17O43808 307 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 TFPI2P48307 235 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 TPPP2P59282 170 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 TMEM183BQ1AE95 376 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 ANKRD39Q53RE8 183 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 A0A1W2PPI3 338 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 VWC2LB2RUY7 222 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 TCF21O43680 179 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 CNTFRP26992 372 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 YTHDF2Q9Y5A9 579 aaKnown RBP13.68□□□□□ -0.22
PCDHB17P-201ENST00000539533 POLQO75417 2590 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 HOXB4P17483 251 aaPredicted RBP13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 SELENOTP62341 195 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 VAMP8Q9BV40 100 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 ZNF257Q9Y2Q1 563 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 E7EUB6 86 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 NDUFS8O00217 210 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 TIMM23O14925 209 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 FOXH1O75593 365 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 TOX4O94842 621 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 CBLN1P23435 193 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 RANP62826 216 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 RPL8P62917 257 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 ZNF90Q03938 601 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 TMEM167AQ8TBQ9 72 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 TP53TG3Q9ULZ0 132 aa13.67□□□□□ -0.22
PCDHB17P-201ENST00000539533 ABCA2Q9BZC7 2435 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 USF1P22415 310 aaPredicted RBP13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 LGALS7P47929 136 aa13.66□□□□□ -0.22
PCDHB17P-201ENST00000539533 KRTAP10-9P60411 292 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms