RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 OPRK1P41145 380 aa12.45□□□□□ -0.42
LTBR-206ENST00000536876 ETV6P41212 452 aa12.45□□□□□ -0.42
LTBR-206ENST00000536876 UCP3P55916 312 aa12.45□□□□□ -0.42
LTBR-206ENST00000536876 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
LTBR-206ENST00000536876 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
LTBR-206ENST00000536876 TP53RKQ96S44 253 aa12.45□□□□□ -0.42
LTBR-206ENST00000536876 M0QYG6 137 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 ATG12O94817 140 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 RPL5P46777 297 aaKnown RBP12.44□□□□□ -0.42
LTBR-206ENST00000536876 RND3P61587 244 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 NUTF2P61970 127 aaKnown RBP12.44□□□□□ -0.42
LTBR-206ENST00000536876 NCS1P62166 190 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 C1QTNF4Q9BXJ3 329 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 DKK2Q9UBU2 259 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
LTBR-206ENST00000536876 A0A087WXM4 84 aa12.43□□□□□ -0.42
LTBR-206ENST00000536876 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
LTBR-206ENST00000536876 ELK1P19419 428 aa12.43□□□□□ -0.42
LTBR-206ENST00000536876 PI3P19957 117 aa12.43□□□□□ -0.42
LTBR-206ENST00000536876 HOXA1P49639 335 aaPredicted RBP12.43□□□□□ -0.42
LTBR-206ENST00000536876 AKR1C2P52895 323 aa12.43□□□□□ -0.42
LTBR-206ENST00000536876 AP2S1P53680 142 aaPredicted RBP12.43□□□□□ -0.42
LTBR-206ENST00000536876 EMP1P54849 157 aa12.43□□□□□ -0.42
LTBR-206ENST00000536876 TNP2Q05952 138 aa12.43□□□□□ -0.42
LTBR-206ENST00000536876 TRAV30A0A087WSZ9 112 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 HPGDSO60760 199 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 CDK2AP2O75956 126 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 NXPH3O95157 252 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 PGAM2P15259 253 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 FXYD7P58549 80 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 VBP1P61758 197 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 RNASE12Q5GAN4 147 aaKnown RBP12.42□□□□□ -0.42
LTBR-206ENST00000536876 C1orf134Q5TEV5 83 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 FAM222AQ5U5X8 452 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 PRSS54Q6PEW0 395 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 ZNF709Q8N972 641 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 NRN1Q9NPD7 142 aa12.42□□□□□ -0.42
LTBR-206ENST00000536876 TNFAIP8O95379 198 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 IFNA21P01568 189 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 RND2P52198 227 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 PIGPP57054 158 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
LTBR-206ENST00000536876 RNF212Q495C1 297 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 AARDQ4LEZ3 155 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 LHFPL1Q86WI0 220 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 FUNDC2Q9BWH2 189 aa12.41□□□□□ -0.42
LTBR-206ENST00000536876 SEPSECSQ9HD40 501 aaKnown RBP12.41□□□□□ -0.42
LTBR-206ENST00000536876 RPS10-NUDT3A0A1W2PQS6 291 aa12.4□□□□□ -0.42
LTBR-206ENST00000536876 BUB3O43684 328 aa12.4□□□□□ -0.42
LTBR-206ENST00000536876 DHODHQ02127 395 aa12.4□□□□□ -0.42
LTBR-206ENST00000536876 GSG1LQ6UXU4 331 aa12.4□□□□□ -0.42
LTBR-206ENST00000536876 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
LTBR-206ENST00000536876 Q8WTZ3 238 aa12.4□□□□□ -0.42
LTBR-206ENST00000536876 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
LTBR-206ENST00000536876 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 C16orf90A8MZG2 172 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 IL4P05112 153 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 OR10J1P30954 320 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 YPEL3P61236 119 aaPredicted RBP12.39□□□□□ -0.43
LTBR-206ENST00000536876 TRIM16LQ309B1 348 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 RNASE10Q5GAN6 216 aaKnown RBP12.39□□□□□ -0.43
LTBR-206ENST00000536876 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 TMEM88Q6PEY1 159 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
LTBR-206ENST00000536876 RRNAD1Q96FB5 475 aaKnown RBP12.39□□□□□ -0.43
LTBR-206ENST00000536876 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 WDR12Q9GZL7 423 aaKnown RBP12.39□□□□□ -0.43
LTBR-206ENST00000536876 KLK11Q9UBX7 282 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
LTBR-206ENST00000536876 IGHV3OR16-12A0A075B7B8 117 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 SMIM9A6NGZ8 99 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 FAM25AB3EWG3 89 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 FAM25CB3EWG5 89 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 FAM25GB3EWG6 89 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 IGKV3-20P01619 116 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 CD3DP04234 171 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 NKX2-1P43699 371 aaPredicted RBP12.38□□□□□ -0.43
LTBR-206ENST00000536876 SP6Q3SY56 376 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
LTBR-206ENST00000536876 C3orf85A0A1B0GTC6 90 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 SOCS3O14543 225 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 HTN3P15516 51 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 UCP1P25874 307 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 OXA1LQ15070 435 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 C1orf158Q8N1D5 194 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 OR52I2Q8NH67 350 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 LHFPL5Q8TAF8 219 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 SLC35B3Q9H1N7 401 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 SAV1Q9H4B6 383 aaPredicted RBP12.37□□□□□ -0.43
LTBR-206ENST00000536876 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
LTBR-206ENST00000536876 TOMM40O96008 361 aa12.36□□□□□ -0.43
LTBR-206ENST00000536876 TBPP20226 339 aa12.36□□□□□ -0.43
LTBR-206ENST00000536876 HTR2BP41595 481 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 335.3 ms