RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 OR1S2Q8NGQ3 325 aa17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 WDR89Q96FK6 387 aaPredicted RBP17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 ACY3Q96HD9 319 aa17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 MARVELD1Q9BSK0 173 aa17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 ZFAND3Q9H8U3 227 aa17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 H3BP45 60 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 SSSCA1O60232 199 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 SCGB2A1O75556 95 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 OR10J1P30954 320 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 SPANXN5Q5MJ07 72 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 SMPXQ9UHP9 88 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 PAIP2BQ9ULR5 123 aaKnown RBP17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 SMAD5-AS1Q9Y6J3 95 aa17.11■□□□□ 0.33
SFSWAP-204ENST00000535399 FAM25EA8MYX2 175 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 PRSS46E5RG02 174 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 SCGB1D2O95969 90 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 MBPP02686 304 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 PAX9P55771 341 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 GAMTQ14353 236 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 SMIM8Q96KF7 97 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 GPN1Q9HCN4 374 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 RCL1Q9Y2P8 373 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 STRAPQ9Y3F4 350 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 DNAH9Q9NYC9 4486 aa17.1■□□□□ 0.33
SFSWAP-204ENST00000535399 IGHV7-4-1A0A0J9YVY3 117 aa17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 C5orf51A6NDU8 294 aa17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 SNRPGP15A8MWD9 76 aa17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 PRAF2O60831 178 aa17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 YPEL3P61236 119 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 C2orf50Q96LR7 162 aa17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 PSENENQ9NZ42 101 aa17.09■□□□□ 0.33
SFSWAP-204ENST00000535399 IGHV3-49A0A0A0MS15 119 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 TRAV14DV4A0A0A6YYC5 116 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 TRAV25A0A0B4J276 109 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 CHEK1O14757 476 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 SCAF4O95104 1147 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 GUCA2BQ16661 112 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 SLC35E1Q96K37 410 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 RAB40CQ96S21 281 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 B9D2Q9BPU9 175 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 GINS3Q9BRX5 216 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 RHPN1-AS1Q9BWJ2 59 aa17.08■□□□□ 0.32
SFSWAP-204ENST00000535399 IGKV1D-37A0A075B6S9 117 aa17.06■□□□□ 0.32
SFSWAP-204ENST00000535399 TAS2R30P59541 319 aa17.06■□□□□ 0.32
SFSWAP-204ENST00000535399 IL15RAQ13261 267 aa17.06■□□□□ 0.32
SFSWAP-204ENST00000535399 GSG1LQ6UXU4 331 aa17.06■□□□□ 0.32
SFSWAP-204ENST00000535399 GTSCR1Q86UQ5 136 aa17.06■□□□□ 0.32
SFSWAP-204ENST00000535399 RNF2Q99496 336 aa17.06■□□□□ 0.32
SFSWAP-204ENST00000535399 PMS2P5A8MQ11 134 aa17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 K7EPK0 472 aa17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 APOHP02749 345 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 CD7P09564 240 aa17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 TMEM14EPQ6UXP3 125 aa17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 RBPMS2Q6ZRY4 209 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 Q8WTZ3 238 aa17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 VSIRQ9H7M9 311 aa17.05■□□□□ 0.32
SFSWAP-204ENST00000535399 IGHV3OR16-13A0A075B7E8 117 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 IGHV3-74A0A0B4J1X5 117 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 TSPAN4O14817 238 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 TSC22D2O75157 780 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 TOMM40O96008 361 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 IGHV4-30-4P0DP06 118 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 ST8SIA2Q92186 375 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 NEURL2Q9BR09 285 aa17.04■□□□□ 0.32
SFSWAP-204ENST00000535399 C7orf66A4D0T2 115 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 CCNKO75909 580 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 RD3LP0DJH9 198 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 CRYBB3P26998 211 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 CD81P60033 236 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 LAMTOR1Q6IAA8 161 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 ACOT7LQ6ZUV0 252 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 LILRB2Q8N423 598 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 THAP8Q8NA92 274 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 METTL26Q96S19 204 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 SPAG8Q99932 426 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 C11orf1Q9H5F2 150 aa17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 LSM5Q9Y4Y9 91 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-204ENST00000535399 IGKV1OR2-108A0A075B7D4 117 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 ZFP92A6NM28 416 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 A8MZ25 164 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 PTTG1O95997 202 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 METTL15P1P0C7V9 234 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 PSG1P11464 419 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 NPPCP23582 126 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 FAM90A2PQ658T7 463 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 C19orf73Q9NVV2 129 aa17.02■□□□□ 0.32
SFSWAP-204ENST00000535399 IGHV3-66A0A0C4DH42 116 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 GOSR2O14653 212 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 SIX6O95475 246 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 FRMD6-AS1P0C7T7 363 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 BMI1P35226 326 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 ZNF90Q03938 601 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 USF2Q15853 346 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 OR8G2PQ6IF36 304 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 TRGV9Q99603 122 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 U3KQE9 123 aa17.01■□□□□ 0.31
SFSWAP-204ENST00000535399 IL4P05112 153 aa17■□□□□ 0.31
SFSWAP-204ENST00000535399 RAB32Q13637 225 aa17■□□□□ 0.31
SFSWAP-204ENST00000535399 WFDC10AQ9H1F0 79 aa17■□□□□ 0.31
SFSWAP-204ENST00000535399 L7N2F9 121 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms