RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 A0A1B0GU03 582 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 TEX22C9J3V5 150 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 C11orf94C9JXX5 98 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 ATG12O94817 140 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 NANOS2P60321 138 aaKnown RBP9.16□□□□□ -0.94
CAPN1-223ENST00000533079 ID3Q02535 119 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 CATR1Q13166 79 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 ODF3L2Q3SX64 289 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 C10orf55Q5SWW7 151 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 TEX261Q6UWH6 196 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 OR4D5Q8NGN0 318 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 C5orf30Q96GV9 206 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 AQP10Q96PS8 301 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 GSKIPQ9P0R6 139 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 FBXL17Q9UF56 701 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 UBQLN2Q9UHD9 624 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 SELENOKQ9Y6D0 94 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 U3KQ87 197 aa9.16□□□□□ -0.94
CAPN1-223ENST00000533079 RNF222A6NCQ9 220 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 ST8SIA3O43173 380 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 RBFOX2O43251 390 aaKnown RBP eCLIP9.15□□□□□ -0.941e-5■■■■□ 19.7
CAPN1-223ENST00000533079 PITX3O75364 302 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 IFNA7P01567 189 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 CRYGCP07315 174 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-223ENST00000533079 ADMP35318 185 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 MAS1LP35410 378 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 NUP62P37198 522 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-223ENST00000533079 RAB32Q13637 225 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 SMCO1Q147U7 214 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF585BQ52M93 769 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 UNQ9165/PRO28630Q6UXU0 137 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 SLC51BQ86UW2 128 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 FAM219AQ8IW50 185 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 RARRES2Q99969 163 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 PLEKHA2Q9HB19 425 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
CAPN1-223ENST00000533079 LINC00473A8K010 186 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 E5RGE8 158 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 TAAR5O14804 337 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 IGHV3-23P01764 117 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 MBPP02686 304 aaPredicted RBP9.14□□□□□ -0.95
CAPN1-223ENST00000533079 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
CAPN1-223ENST00000533079 LRRC37A5PQ49AS3 106 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 OR1S1Q8NH92 325 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 ARL6Q9H0F7 186 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 HRH4Q9H3N8 390 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 DAZ1Q9NQZ3 744 aaKnown RBP9.14□□□□□ -0.95
CAPN1-223ENST00000533079 APLNQ9ULZ1 77 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
CAPN1-223ENST00000533079 K7EPK0 472 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 TNFSF12O43508 249 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 BCL2L11O43521 198 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 KBTBD11O94819 623 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 IGKV1-39P01597 117 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 IGKV1D-39P04432 117 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
CAPN1-223ENST00000533079 P2RY1P47900 373 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 MFAP2P55001 183 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 THOC7Q6I9Y2 204 aaKnown RBP9.13□□□□□ -0.95
CAPN1-223ENST00000533079 OR51H1Q8NH63 302 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 TMEM190Q8WZ59 177 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 CSTL1Q9H114 145 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 C11orf1Q9H5F2 150 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 CACFD1Q9UGQ2 172 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 PRELID3BQ9Y3B1 194 aa9.13□□□□□ -0.95
CAPN1-223ENST00000533079 IGLV11-55A0A075B6I3 123 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 KANTRA0A1W2PQU2 76 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 MFSD2BA6NFX1 497 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 IGLL5B9A064 214 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 FAM90A26D6RGX4 464 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 CLEC3BP05452 202 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 P0C879 139 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 DEFA4P12838 97 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 GPR183P32249 361 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 LPAR6P43657 344 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-223ENST00000533079 CMC4P56277 68 aaPredicted RBP9.12□□□□□ -0.95
CAPN1-223ENST00000533079 BRWD1-AS2P59051 145 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 RPL30P62888 115 aaKnown RBP9.12□□□□□ -0.95
CAPN1-223ENST00000533079 TMEM167AQ8TBQ9 72 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 RRNAD1Q96FB5 475 aaKnown RBP9.12□□□□□ -0.95
CAPN1-223ENST00000533079 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 OR5AC2Q9NZP5 309 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 THYN1Q9P016 225 aa9.12□□□□□ -0.95
CAPN1-223ENST00000533079 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 PRSS29PA6NIE9 313 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 FCGR3BO75015 233 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 S1PR2O95136 353 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 HPRT1P00492 218 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 IL6RP08887 468 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-223ENST00000533079 PVALBP20472 110 aaPredicted RBP9.11□□□□□ -0.95
CAPN1-223ENST00000533079 EIF5AP63241 154 aaKnown RBP9.11□□□□□ -0.95
CAPN1-223ENST00000533079 C19orf35Q6ZS72 473 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms