RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 IL18Q14116 193 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 LGALS9CQ6DKI2 356 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 PRSS54Q6PEW0 395 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 TRPT1Q86TN4 253 aaKnown RBP12.27□□□□□ -0.45
CPSF1-207ENST00000531727 SLC24A4Q8NFF2 622 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 DCANP1Q8TF63 244 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 PRRT1Q99946 306 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 RABL2AQ9UBK7 228 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-207ENST00000531727 RABL2BQ9UNT1 228 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 TMEM56-RWDD3S4R434 201 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 U3KQE9 123 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 FRAS1Q86XX4 4008 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 DEFB4AO15263 64 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 IFNA4P05014 189 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 GIG44P09565 113 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-207ENST00000531727 RND2P52198 227 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 YPEL3P61236 119 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-207ENST00000531727 TMEM41BQ5BJD5 291 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 RPP25LQ8N5L8 163 aaKnown RBP12.26□□□□□ -0.45
CPSF1-207ENST00000531727 Q8WTZ3 238 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 DIRAS2Q96HU8 199 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
CPSF1-207ENST00000531727 HNRNPCP07910 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
CPSF1-207ENST00000531727 SPP1P10451 314 aa12.25□□□□□ -0.45
CPSF1-207ENST00000531727 OR10J1P30954 320 aa12.25□□□□□ -0.45
CPSF1-207ENST00000531727 EIF2B2P49770 351 aaKnown RBP12.25□□□□□ -0.45
CPSF1-207ENST00000531727 MORN3Q6PF18 240 aaPredicted RBP12.25□□□□□ -0.45
CPSF1-207ENST00000531727 Q8NAQ8 132 aa12.25□□□□□ -0.45
CPSF1-207ENST00000531727 OR51S1Q8NGJ8 323 aa12.25□□□□□ -0.45
CPSF1-207ENST00000531727 TMEM170AQ8WVE7 144 aa12.25□□□□□ -0.45
CPSF1-207ENST00000531727 IL22RA2Q969J5 263 aa12.25□□□□□ -0.45
CPSF1-207ENST00000531727 ANKRD20A5PA0PJZ0 165 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 HELTA6NFD8 242 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 KNCNA6PVL3 124 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 NXPH3O95157 252 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 SULT1A3P0DMM9 295 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 SULT1A4P0DMN0 295 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 NPY1RP25929 384 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 NMSQ5H8A3 153 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 ETFRF1Q6IPR1 90 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 C16orf54Q6UWD8 224 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 CLVS1Q8IUQ0 354 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-207ENST00000531727 DYNC2LI1Q8TCX1 351 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 C2CD4CQ8TF44 421 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 GLMPQ8WWB7 406 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 CCDC59Q9P031 241 aaKnown RBP12.24□□□□□ -0.45
CPSF1-207ENST00000531727 KCNIP3Q9Y2W7 256 aa12.24□□□□□ -0.45
CPSF1-207ENST00000531727 GSTZ1O43708 216 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-207ENST00000531727 DEDDO75618 318 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 C4BPBP20851 252 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 AP2S1P53680 142 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-207ENST00000531727 DHRS2Q13268 280 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 ACTL10Q5JWF8 245 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 NOXA1Q86UR1 476 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 RAB2BQ8WUD1 216 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 NPIPB3Q92617 1050 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
CPSF1-207ENST00000531727 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-207ENST00000531727 IL4P05112 153 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
CPSF1-207ENST00000531727 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 TCTAP57738 103 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
CPSF1-207ENST00000531727 USF2Q15853 346 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-207ENST00000531727 ACY3Q96HD9 319 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 BCL7BQ9BQE9 202 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
CPSF1-207ENST00000531727 RSL24D1Q9UHA3 163 aaKnown RBP12.22□□□□□ -0.45
CPSF1-207ENST00000531727 TOMM40O96008 361 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 MIFP14174 115 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 CCR6P51684 374 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 TMBIM6P55061 237 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 RAB40CQ96S21 281 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 HSPB7Q9UBY9 170 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 U3KQ87 197 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 AGRNO00468 2067 aa12.21□□□□□ -0.45
CPSF1-207ENST00000531727 A0A0B4J2A0 478 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 C11orf94C9JXX5 98 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 FAM90A26D6RGX4 464 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 IFNA10P01566 189 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 SMCO1Q147U7 214 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 DTD1Q8TEA8 209 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
CPSF1-207ENST00000531727 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 SHPKQ9UHJ6 478 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 X6R8D5 127 aa12.2□□□□□ -0.46
CPSF1-207ENST00000531727 DNAH6Q9C0G6 4158 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 BUB3O43684 328 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 PSG1P11464 419 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 AKR1C4P17516 323 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
CPSF1-207ENST00000531727 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
CPSF1-207ENST00000531727 SIGLEC15Q6ZMC9 328 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms