RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DEFB131BA0A096LNP1 70 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 HNRNPCP07910 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 EIF2B2P49770 351 aaKnown RBP13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 RND2P52198 227 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 SPCS3P61009 180 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 SCGB2B2Q4G0G5 96 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 PRSS54Q6PEW0 395 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 CCDC71LQ8N9Z2 235 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 LHFPL5Q8TAF8 219 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 XCL2Q9UBD3 114 aa13.26□□□□□ -0.29
SSSCA1-206ENST00000531405 A0A1B0GVY2 172 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 RPS10-NUDT3A0A1W2PQS6 291 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 AMBPP02760 352 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 OR10J1P30954 320 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 HTR2BP41595 481 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 DHODHQ02127 395 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 USF2Q15853 346 aaPredicted RBP13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 TERB2Q8NHR7 220 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 ZFAND1Q8TCF1 268 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 HEYLQ9NQ87 328 aaPredicted RBP13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 MTFP1Q9UDX5 166 aa13.25□□□□□ -0.29
SSSCA1-206ENST00000531405 FAM90A26D6RGX4 464 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 RORCP51449 518 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 LINC00336Q6ZUF6 198 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 Q8WTZ3 238 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 TMEM170AQ8WVE7 144 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 ABHD1Q96SE0 405 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 TMEM222Q9H0R3 208 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 EXTL2Q9UBQ6 330 aa13.24□□□□□ -0.29
SSSCA1-206ENST00000531405 DNAH11Q96DT5 4516 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 NXPH3O95157 252 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 TNFAIP8O95379 198 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 IL4P05112 153 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 TBPP20226 339 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 YPEL3P61236 119 aaPredicted RBP13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 AARDQ4LEZ3 155 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 C2orf83Q53S99 150 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 FAAP20Q6NZ36 180 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 MZT2AQ6P582 158 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
SSSCA1-206ENST00000531405 H3BMM0 161 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 M0R2N4 97 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 CDS2O95674 445 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 RAB3DO95716 219 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 CD74P04233 296 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 SLC25A4P12235 298 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 AP2S1P53680 142 aaPredicted RBP13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 MEF2DQ14814 521 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 FAM219AQ8IW50 185 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 SELENOHQ8IZQ5 122 aaKnown RBP13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 POM121L12Q8N7R1 296 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 TMEM229BQ8NBD8 167 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 SLC24A4Q8NFF2 622 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 OR52E5Q8NH55 327 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 GLYATL2Q8WU03 294 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 GPR146Q96CH1 333 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 NACAE9PAV3 2078 aa13.22□□□□□ -0.29
SSSCA1-206ENST00000531405 CEBPZOSA8MTT3 80 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 TAS2R19P59542 299 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 DEFB1P60022 68 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 SNRPD3P62318 126 aaKnown RBP13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 STEAP1BQ6NZ63 245 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 NPIPB3Q92617 1050 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 RBPMSQ93062 196 aaKnown RBP13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 ACY3Q96HD9 319 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 RTBDNQ9BSG5 229 aaPredicted RBP13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 NDUFAF3Q9BU61 184 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 C1QTNF4Q9BXJ3 329 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 NAA50Q9GZZ1 169 aaKnown RBP13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 NAA60Q9H7X0 242 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 NRN1Q9NPD7 142 aa13.21□□□□□ -0.29
SSSCA1-206ENST00000531405 TEX13DA0A0J9YY54 714 aaPredicted RBP13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 RTL8CO15255 209 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 BUB3O43684 328 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 P0DMU3 169 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 FAM231AP0DMU4 169 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 FAM231CP0DMU5 169 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 GDF5OSQ5U4N7 250 aa13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
SSSCA1-206ENST00000531405 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 TOMM40O96008 361 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 IGKV3-20P01619 116 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 RD3LP0DJH9 198 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 EMP1P54849 157 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 FXYD7P58549 80 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 AP3S1Q92572 193 aa13.19□□□□□ -0.3
SSSCA1-206ENST00000531405 PSG1P11464 419 aa13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 HLA-DRB4P13762 266 aa13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 ZNF182P17025 639 aaPredicted RBP13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 NPY1RP25929 384 aa13.18□□□□□ -0.3
SSSCA1-206ENST00000531405 GSG1LQ6UXU4 331 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms