RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 AKR1C2P52895 323 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 BRWD1-AS2P59051 145 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 OR2B8PP59922 312 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 GNB2P62879 340 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 IFITM2Q01629 132 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 CATR1Q13166 79 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 KLRD1Q13241 179 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 IL15RAQ13261 267 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 EXOSC2Q13868 293 aaKnown RBP3.34□□□□□ -1.87
CD44-226ENST00000527889 LGALSLQ3ZCW2 172 aaPredicted RBP3.34□□□□□ -1.87
CD44-226ENST00000527889 ZNF585BQ52M93 769 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 LEMD1Q68G75 181 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 SPNS3Q6ZMD2 512 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 SLC25A48Q6ZT89 311 aaKnown RBP3.34□□□□□ -1.87
CD44-226ENST00000527889 ODF3L1Q8IXM7 274 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 PDZD9Q8IXQ8 264 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 C11orf42Q8N5U0 333 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 C8orf31Q8N9H6 132 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 OR1L6Q8NGR2 347 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 OR13D1Q8NGV5 346 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 OR1S1Q8NH92 325 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 CLDND2Q8NHS1 167 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 C8orf46Q8TAG6 207 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 ASB13Q8WXK3 278 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 DCUN1D4Q92564 292 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 RBPMSQ93062 196 aaKnown RBP3.34□□□□□ -1.87
CD44-226ENST00000527889 ISOC2Q96AB3 205 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 GPR146Q96CH1 333 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 TMEM56Q96MV1 263 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 GGACTQ9BVM4 153 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 TMPRSS5Q9H3S3 457 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 OR5AC2Q9NZP5 309 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 RCL1Q9Y2P8 373 aaKnown RBP3.34□□□□□ -1.87
CD44-226ENST00000527889 TMEM56-RWDD3S4R434 201 aa3.34□□□□□ -1.87
CD44-226ENST00000527889 NSD1Q96L73 2696 aaPredicted RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 IGHV4-30-2A0A087WSY4 118 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 IGHV4-28A0A0C4DH34 117 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 IGHV4-61A0A0C4DH41 118 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 DUXBA0A1W2PPF3 345 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 A0A1W2PRF3 423 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 A0A1W2PRM7 423 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 MSGN1A6NI15 193 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 HMSDA8MTL9 139 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 SEC14L6B5MCN3 397 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 K7EPK0 472 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 SSSCA1O60232 199 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 GPR137BO60478 399 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 KRASP01116 189 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 FSHBP01225 129 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 ORM1P02763 201 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 SLC25A4P12235 298 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 G6PCP35575 357 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 REG1BP48304 166 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 CAV2P51636 162 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 CRYBA4P53673 196 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 LMO4P61968 165 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 CYCSP99999 105 aaKnown RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 DIAPH2-AS1Q14236 149 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 OPCMLQ14982 345 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 PSG5Q15238 335 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 MSMO1Q15800 293 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 TMEM30BQ3MIR4 351 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 NMSQ5H8A3 153 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 OR8G2PQ6IF36 304 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 C11orf87Q6NUJ2 197 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 PRSS54Q6PEW0 395 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 UQCC3Q6UW78 93 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 MRPL52Q86TS9 123 aaKnown RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 ABHD12Q8N2K0 398 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 PNKDQ8N490 385 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 FAM71E2Q8N5Q1 922 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 Q8N7P7 452 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 ZNF383Q8NA42 475 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 LY6G5BQ8NDX9 201 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 LFNGQ8NES3 379 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 OR4D5Q8NGN0 318 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 OR10X1Q8NGY0 326 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 C10orf105Q8TEF2 133 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 IL22RA2Q969J5 263 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 URB1-AS1Q96HZ7 61 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 OR5B12Q96R08 314 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 HSD17B10Q99714 261 aaKnown RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 SPIN2AQ99865 258 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 SPIN2BQ9BPZ2 258 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 RNF126Q9BV68 326 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 MRPL20Q9BYC9 149 aaKnown RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 TMEM133Q9H2Q1 129 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 MMP26Q9NRE1 261 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 SPANXA1Q9NS26 97 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.33□□□□□ -1.88
CD44-226ENST00000527889 C1RLQ9NZP8 487 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 CACNG5Q9UF02 275 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 TMED3Q9Y3Q3 217 aa3.33□□□□□ -1.88
CD44-226ENST00000527889 IGHV2-26A0A0B4J1V2 119 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 IGHV3-72A0A0B4J1Y9 119 aa3.32□□□□□ -1.88
CD44-226ENST00000527889 TRAV3A0A0B4J244 114 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms