RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 P2RY1P47900 373 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 MFAP4P55083 255 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 XGP55808 180 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 CATR1Q13166 79 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 RCN1Q15293 331 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 ZNF600Q6ZNG1 722 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 ZNF818PQ6ZRF7 136 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 C15orf53Q8NAA6 179 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 ZNF114Q8NC26 417 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 UFD1Q92890 307 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 RAB40CQ96S21 281 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 TXN2Q99757 166 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 C1QTNF4Q9BXJ3 329 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 TMEM231Q9H6L2 316 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 ANXA10Q9UJ72 324 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 OR51B2Q9Y5P1 312 aa5.63□□□□□ -1.51
USP48-212ENST00000527823 HELTA6NFD8 242 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 H3BMM0 161 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 RHODO00212 210 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 ARL6IP5O75915 188 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 PPYP01298 95 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 FUSP35637 526 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP48-212ENST00000527823 RASSF2P50749 326 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 ERVK-16P61578 105 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 FABP5Q01469 135 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 OXA1LQ15070 435 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 SPHARQ15513 63 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 PXDC1Q5TGL8 231 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 AADACL3Q5VUY0 350 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 HACD4Q5VWC8 232 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 BPIFB6Q8NFQ5 453 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 PINX1Q96BK5 328 aaKnown RBP5.62□□□□□ -1.51
USP48-212ENST00000527823 ATG101Q9BSB4 218 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 PLCXD1Q9NUJ7 323 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 YTHDF2Q9Y5A9 579 aaKnown RBP5.62□□□□□ -1.51
USP48-212ENST00000527823 RFNGQ9Y644 331 aa5.62□□□□□ -1.51
USP48-212ENST00000527823 IGHV3OR16-12A0A075B7B8 117 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 IFITM5A6NNB3 132 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 RLN1P04808 185 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 HLA-DRB4P13762 266 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 CRYBB3P26998 211 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 FCGR2CP31995 323 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 G6PCP35575 357 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 PPP5CP53041 499 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 FXYD7P58549 80 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 FXYD4P59646 89 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 DEFB1P60022 68 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 OGFRL1Q5TC84 451 aaPredicted RBP5.61□□□□□ -1.51
USP48-212ENST00000527823 GDF5OSQ5U4N7 250 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 TMEM17Q86X19 198 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 ZNF709Q8N972 641 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 FRZBQ92765 325 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 SLC5A7Q9GZV3 580 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 S100A14Q9HCY8 104 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 MSRB1Q9NZV6 116 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 MRPL36Q9P0J6 103 aaKnown RBP5.61□□□□□ -1.51
USP48-212ENST00000527823 HLA-DRB4X5D2U9 266 aa5.61□□□□□ -1.51
USP48-212ENST00000527823 SMIM9A6NGZ8 99 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 FAM90A26D6RGX4 464 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 GNG2P59768 71 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 NUTF2P61970 127 aaKnown RBP5.6□□□□□ -1.51
USP48-212ENST00000527823 DHRS2Q13268 280 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 ARL6IP1Q15041 203 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 CDNFQ49AH0 187 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 KCTD21Q4G0X4 260 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 C8orf59Q8N0T1 100 aaPredicted RBP5.6□□□□□ -1.51
USP48-212ENST00000527823 FCAMRQ8WWV6 532 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 TMEM56Q96MV1 263 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 METTL26Q96S19 204 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 CTDSP1Q9GZU7 261 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 ATG5Q9H1Y0 275 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 MDFICQ9P1T7 246 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 PRNDQ9UKY0 176 aa5.6□□□□□ -1.51
USP48-212ENST00000527823 A0A1W2PS18 150 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 SMIM30A4D0T7 59 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 METTL21EPA6NDL7 271 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 ERICH4A6NGS2 130 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 KRASP01116 189 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 NPPCP23582 126 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 PSMA1P25786 263 aaKnown RBP5.59□□□□□ -1.51
USP48-212ENST00000527823 NPBWR1P48145 328 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 ALDH3B2P48448 385 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 ARPC4P59998 168 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 DAD1P61803 113 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 PRCDQ00LT1 54 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 BEST4Q8NFU0 473 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 MOB3AQ96BX8 217 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 Q9H3A6 140 aa5.59□□□□□ -1.51
USP48-212ENST00000527823 RPS10-NUDT3A0A1W2PQS6 291 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 ATP5HO75947 161 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 SNAPC5O75971 98 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 IGKV3-20P01619 116 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 FCER2P06734 321 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 HSMCR30P0CW71 290 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 F2RP25116 425 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 GNRHRP30968 328 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 RANBP1P43487 201 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 DLK1P80370 383 aa5.58□□□□□ -1.52
USP48-212ENST00000527823 MLLT11Q13015 90 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms