RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SEC22CQ9BRL7 303 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 WDR12Q9GZL7 423 aaKnown RBP3.91□□□□□ -1.78
SVIP-202ENST00000525670 MAGT1Q9H0U3 335 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 C20orf85Q9H1P6 137 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 SLA2Q9H6Q3 261 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 ENY2Q9NPA8 101 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 TMEM14BQ9NUH8 114 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 SLC2A8Q9NY64 477 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 PTTG2Q9NZH5 202 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 RABL2AQ9UBK7 228 aaPredicted RBP3.91□□□□□ -1.78
SVIP-202ENST00000525670 PEF1Q9UBV8 284 aaKnown RBP3.91□□□□□ -1.78
SVIP-202ENST00000525670 RABL2BQ9UNT1 228 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 ZNF257Q9Y2Q1 563 aa3.91□□□□□ -1.78
SVIP-202ENST00000525670 IGKV3-7A0A075B6H7 116 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 IGHV3-66A0A0C4DH42 116 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 A0A0G2JLM5 398 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 ZNF320A2RRD8 509 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 IZUMO1RA6ND01 250 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 FAM223BA6NKX1 122 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 CENPXA8MT69 81 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 MPTX1A8MV57 137 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 FAM25EA8MYX2 175 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 PRAC2D3DTV9 90 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 H3BUA1 57 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 K7EIL1 84 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 PLA2G10O15496 165 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 LYRM1O43325 122 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 TPPPO94811 219 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 DHFRP00374 187 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 MT-CO2P00403 227 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 HSPB1P04792 205 aaKnown RBP3.9□□□□□ -1.79
SVIP-202ENST00000525670 P0C879 139 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 ANXA3P12429 323 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 PRCDQ00LT1 54 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 SURF2Q15527 256 aaPredicted RBP3.9□□□□□ -1.79
SVIP-202ENST00000525670 DEFB121Q5J5C9 76 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 THOC7Q6I9Y2 204 aaKnown RBP3.9□□□□□ -1.79
SVIP-202ENST00000525670 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 SLC25A42Q86VD7 318 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 NECAP1Q8NC96 275 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 DYNLRB2Q8TF09 96 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 TMEM56Q96MV1 263 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 TSC22D3Q99576 134 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 C20orf24Q9BUV8 137 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 WFDC10AQ9H1F0 79 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 NDUFA4L2Q9NRX3 87 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 NUDT15Q9NV35 164 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 TBC1D24Q9ULP9 559 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
SVIP-202ENST00000525670 F11RQ9Y624 299 aaKnown RBP3.9□□□□□ -1.79
SVIP-202ENST00000525670 HUWE1Q7Z6Z7 4374 aaKnown RBP3.89□□□□□ -1.79
SVIP-202ENST00000525670 TRBV9A0A0B4J1U6 114 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 C9orf170A2RU37 121 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 K7EIM0 57 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 SSSCA1O60232 199 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ATG12O94817 140 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 YIF1AO95070 293 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 NDUFB6O95139 128 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 SFT2D2O95562 160 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 CRYGCP07315 174 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 OR4E1P0C645 316 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 SULT1A3P0DMM9 295 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 SULT1A4P0DMN0 295 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 IGHV4-30-4P0DP06 118 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 RNASE2P10153 161 aaKnown RBP3.89□□□□□ -1.79
SVIP-202ENST00000525670 SPNP16150 400 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 PTBP1P26599 531 aaKnown RBP eCLIP3.89□□□□□ -1.79
SVIP-202ENST00000525670 SNCAP37840 140 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 OPRK1P41145 380 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 HSPE1P61604 102 aaKnown RBP3.89□□□□□ -1.79
SVIP-202ENST00000525670 IFITM3Q01628 133 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 DHODHQ02127 395 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 DHRS2Q13268 280 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ZNF846Q147U1 533 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 C9orf66Q5T8R8 295 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 GGNBP1Q5YKI7 109 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ZNF343Q6P1L6 599 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 PLET1Q6UQ28 207 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 BTNL8Q6UX41 500 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 SMIM29Q86T20 159 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 LGI3Q8N145 548 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 OR5B3Q8NH48 314 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ZNF502Q8TBZ5 544 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ENKURQ8TC29 256 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ACY3Q96HD9 319 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 USMG5Q96IX5 58 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 SCGB3A2Q96PL1 93 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 OR4C12Q96R67 309 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 ASCL2Q99929 193 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 RBKSQ9H477 322 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 RANGRFQ9HD47 186 aaPredicted RBP3.89□□□□□ -1.79
SVIP-202ENST00000525670 C21orf62Q9NYP8 219 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 MRPL36Q9P0J6 103 aaKnown RBP3.89□□□□□ -1.79
SVIP-202ENST00000525670 KCNIP3Q9Y2W7 256 aa3.89□□□□□ -1.79
SVIP-202ENST00000525670 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 A0A0B4J2A0 478 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 FAM240BA0A1B0GVZ2 78 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 NAP1L6A6NFF2 107 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms