RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 BCAP31P51572 246 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 TAS2R30P59541 319 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 S100A10P60903 97 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 POLR2GP62487 172 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 PAFAH1B2P68402 229 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 ID3Q02535 119 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 AKR1C1Q04828 323 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 DEFB114Q30KQ6 69 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 CD300EQ496F6 205 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 PRSS54Q6PEW0 395 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 IL34Q6ZMJ4 242 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 TMEM116Q8NCL8 245 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR4D5Q8NGN0 318 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 NPIPB3Q92617 1050 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 C2orf50Q96LR7 162 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 FNDC4Q9H6D8 234 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 TUBA4BQ9H853 241 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 MGAT4CQ9UBM8 478 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 LSM5Q9Y4Y9 91 aaKnown RBP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 PUS1Q9Y606 427 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 PLXNB1O43157 2135 aa4.1□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGHV7-4-1A0A0J9YVY3 117 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 SMCO3A2RU48 225 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 MPTX1A8MV57 137 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 GOSR2O14653 212 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 TSC22D2O75157 780 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 CFDP00746 253 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 RLN2P04090 185 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 IGLC1P0CG04 106 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 PET100P0DJ07 73 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 RD3LP0DJH9 198 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 C8orf88P0DMB2 117 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 NPPCP23582 126 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 CAV2P51636 162 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 CD81P60033 236 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 YPEL3P61236 119 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 RPL11P62913 178 aaKnown RBP4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 CYCSP99999 105 aaKnown RBP4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 IFITM3Q01628 133 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 TIGITQ495A1 244 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR8G2PQ6IF36 304 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 C11orf87Q6NUJ2 197 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 TOMM20LQ6UXN7 152 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 S100A7AQ86SG5 101 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 STX12Q86Y82 276 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 TMEM61Q8N0U2 210 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR10P1Q8NGE3 313 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 PPP1R14BQ96C90 147 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 SMIM8Q96KF7 97 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR10C1Q96KK4 312 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 SPAG8Q99932 426 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 NEURL2Q9BR09 285 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 MARVELD1Q9BSK0 173 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 RHPN1-AS1Q9BWJ2 59 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 MLXQ9UH92 298 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 SMPXQ9UHP9 88 aa4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 RCL1Q9Y2P8 373 aaKnown RBP4.09□□□□□ -1.75
HMGB1P40-201ENST00000525121 TNCP24821 2201 aa4.09□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGHV3-49A0A0A0MS15 119 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 IZUMO1RA6ND01 250 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 HELTA6NFD8 242 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 DNASE2O00115 360 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 CHEK1O14757 476 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 TSPAN4O14817 238 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 TOMM40O96008 361 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGKV1-17P01599 117 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 MBPP02686 304 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 IL4P05112 153 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 HNRNPCP07910 306 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 METTL15P1P0C7V9 234 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 CMC4P56277 68 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 LYZP61626 148 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 HBG1P69891 147 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 HBG2P69892 147 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 DLK1P80370 383 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 RAB31Q13636 194 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 GAMTQ14353 236 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 MLANAQ16655 118 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 RGS21Q2M5E4 152 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 ADAMTSL5Q6ZMM2 481 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 NBEAL1Q6ZS30 2694 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 ACOT7LQ6ZUV0 252 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 TCF24Q7RTU0 167 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 LILRB2Q8N423 598 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR51G1Q8NGK1 321 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 TMEM170AQ8WVE7 144 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 WDR89Q96FK6 387 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 TRGV9Q99603 122 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 B9D2Q9BPU9 175 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 PBDC1Q9BVG4 233 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZFAND3Q9H8U3 227 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 MRPL36Q9P0J6 103 aaKnown RBP4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 RABAC1Q9UI14 185 aa4.08□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGKV3-7A0A075B6H7 116 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGHV3OR16-13A0A075B7E8 117 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGHV3-74A0A0B4J1X5 117 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 C7orf66A4D0T2 115 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR11H12B2RN74 326 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 FNDC10F2Z333 226 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 K7EPK0 472 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms