RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 EMDP50402 254 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 DIAPH2-AS1Q14236 149 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 GGTLC2Q14390 218 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 MPV17LQ2QL34 196 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 CEACAM16Q2WEN9 425 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 Q5XG85 94 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 HLA-DQA1Q5Y7H0 255 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 DNM1P46Q6ZS02 220 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 SLC25A42Q86VD7 318 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 TMEM52Q8NDY8 209 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 OR51H1Q8NH63 302 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF721Q8TF20 911 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 AQP3Q92482 292 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 NEURL3Q96EH8 262 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 ADOQ96SZ5 270 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
HDAC3-216ENST00000523088 TTTY12Q9BZ98 90 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 FGF20Q9NP95 211 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 ADGRG4Q8IZF6 3080 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 FREM3P0C091 2139 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 TRAV9-1A0A075B6T8 112 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 MUC21A0A0G2JKD1 596 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 MUC21A0A140T8X8 626 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 C1orf226A1L170 272 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 PRSS29PA6NIE9 313 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 RIIAD1A6NNX1 92 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 H3BMG7 143 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 ISLRO14498 428 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 UQCRQO14949 82 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 SOCS1O15524 211 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 NDUFB4O95168 129 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 OXTP01178 125 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 GPR183P32249 361 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 NTF4P34130 210 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 RBM11P57052 281 aaKnown RBP6.15□□□□□ -1.42
HDAC3-216ENST00000523088 TMEM258P61165 79 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 CX3CL1P78423 397 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 UNC119Q13432 240 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 FHL3Q13643 280 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 CD226Q15762 336 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 KLF17Q5JT82 389 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF506Q5JVG8 444 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 MUC21Q5SSG8 566 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 SLC25A30Q5SVS4 291 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 IBA57Q5T440 356 aaKnown RBP6.15□□□□□ -1.42
HDAC3-216ENST00000523088 HIST2H2BCQ6DN03 193 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 SLC35E4Q6ICL7 350 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 OR4X2Q8NGF9 303 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 NMES1Q9C002 83 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 ISG20L2Q9H9L3 353 aaKnown RBP6.15□□□□□ -1.42
HDAC3-216ENST00000523088 PRR13Q9NZ81 148 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 PCTPQ9UKL6 214 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 NSG2Q9Y328 171 aa6.15□□□□□ -1.42
HDAC3-216ENST00000523088 ANKRD17O75179 2603 aaKnown RBP6.15□□□□□ -1.43
HDAC3-216ENST00000523088 APCP25054 2843 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 TRGV5A0A0B4J1U4 118 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 TMEM178BH3BS89 294 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 IGHG2P01859 326 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 AMY1AP04745 511 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 ATP1B1P05026 303 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 CTXN1P60606 82 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 SLC38A11Q08AI6 406 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 RRN3P1Q2M238 152 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF791Q3KP31 576 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF260Q3ZCT1 412 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 MIDNQ504T8 468 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 ANKRD34AQ69YU3 496 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 LEG1Q6P5S2 330 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 TMEM179BQ7Z7N9 219 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 TRPT1Q86TN4 253 aaKnown RBP6.14□□□□□ -1.43
HDAC3-216ENST00000523088 GAPTQ8N292 157 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 IL17DQ8TAD2 202 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 TM2D1Q9BX74 207 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 SDR39U1Q9NRG7 319 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-216ENST00000523088 MTFP1Q9UDX5 166 aa6.14□□□□□ -1.43
HDAC3-216ENST00000523088 ANKHD1Q8IWZ3 2542 aaKnown RBP6.14□□□□□ -1.43
HDAC3-216ENST00000523088 TMEM272A0A1B0GTI8 110 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 H0YL77 283 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 M0R2P5 195 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 SLC17A2O00624 439 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 DUSP14O95147 198 aaKnown RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 NTN1O95631 604 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 SLC25A5P05141 298 aaKnown RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 EIF4EP06730 217 aaKnown RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 P0DMU3 169 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 FAM231AP0DMU4 169 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 FAM231CP0DMU5 169 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 CCL3P10147 92 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms