RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 FAM181BA6NEQ2 426 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 CIARTQ8N365 385 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 MDS2Q8NDY4 140 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 H3BTX0 84 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 FMC1Q96HJ9 113 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 PROB1E7EW31 1015 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 MYOD1P15172 320 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 PEAR1Q5VY43 1037 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 MBD3L4A6NDZ8 208 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 MBD3L3A6NE82 208 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 MBD3L5A6NJ08 208 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 MOSP00540 346 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 IGHG3P01860 377 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 IGFBP3P17936 291 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 ATP5L2Q7Z4Y8 100 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 BCL6BQ8N143 479 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 MBD3L2Q8NHZ7 208 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 SPRR3Q9UBC9 169 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 POLR3KQ9Y2Y1 108 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 CMC4P56277 68 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 LINC00305Q7Z4B0 112 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 THY1P04216 161 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 ASCL4Q6XD76 172 aa10.22□□□□□ -0.77
PCDHGA6-201ENST00000517434 LINC00114Q6XXX2 140 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 CHD5Q8TDI0 1954 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 MUC21A0A0G2JKD1 596 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 MUC21A0A140T8X8 626 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 NDUFA3O95167 84 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 IGHV2-5P01817 119 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 MUC21Q5SSG8 566 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 FAM71F2Q6NXP2 309 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 C1QL2Q7Z5L3 287 aa10.21□□□□□ -0.77
PCDHGA6-201ENST00000517434 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 VWA8A3KMH1 1905 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 A0A087X0K7 114 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 OOSP1A8MZH6 123 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 TDGF1P13385 188 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 VDAC2P45880 294 aaPredicted RBP10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 KIR3DS1Q14943 382 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 ZNRF1Q8ND25 227 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 C8orf46Q8TAG6 207 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 COQ2Q96H96 371 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 SMPXQ9UHP9 88 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 TRAV8-1A0A0A6YYK1 113 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 GPX1P07203 203 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 IGFBP2P18065 325 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 LCN12Q6JVE5 192 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 ADAMTSL5Q6ZMM2 481 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 IFI27L2Q9H2X8 130 aa10.21□□□□□ -0.78
PCDHGA6-201ENST00000517434 IGFL3Q6UXB1 125 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 DLX4Q92988 240 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 AGMATQ9BSE5 352 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 LEPP41159 167 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 MIR17HGQ75NE6 70 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 PPP1R27Q86WC6 154 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 CRIM1Q9NZV1 1036 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 BRCA2P51587 3418 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 IGHV3OR16-10A0A075B7F0 116 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 TRAV24A0A0B4J272 114 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 PPBPP02775 128 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 MOB4Q9Y3A3 225 aa10.2□□□□□ -0.78
PCDHGA6-201ENST00000517434 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 IGKCP01834 107 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 OR9G9P0C7N8 305 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 SRSF6Q13247 344 aaKnown RBP10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 PSG3Q16557 428 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 KIR3DL3Q8N743 410 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 MGST2Q99735 147 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 SELENOKQ9Y6D0 94 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 IGHV4-39P01824 125 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 PRTN3P24158 256 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 VKORC1L1Q8N0U8 176 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 FAM216BQ8N7L0 139 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 TSKUQ8WUA8 353 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 GUSBP1Q15486 140 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
PCDHGA6-201ENST00000517434 CACNG8Q8WXS5 425 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 CD33P20138 364 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 GATA3P23771 443 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 IGHV1-18A0A0C4DH31 117 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 CDKN1BP46527 198 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 PRSS33Q8NF86 280 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 KLF2Q9Y5W3 355 aaPredicted RBP10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 MTCL1Q9Y4B5 1905 aaKnown RBP10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 J3QRE1 110 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 TMEM144Q7Z5S9 345 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 ARPC1AQ92747 370 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 ERG28Q9UKR5 140 aa10.18□□□□□ -0.78
PCDHGA6-201ENST00000517434 GAS1P54826 345 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms