RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 IGHV7-4-1A0A0J9YVY3 117 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 PRSS46E5RG02 174 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 SSSCA1O60232 199 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 OR10J1P30954 320 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 OR1S2Q8NGQ3 325 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 GSKIPQ9P0R6 139 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 SMPXQ9UHP9 88 aa13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 RCL1Q9Y2P8 373 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-216ENST00000506537 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 SCAF4O95104 1147 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 SCGB1D2O95969 90 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 GPX4P36969 197 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 PAX9P55771 341 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 DEFA1P59665 94 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 DEFA3P59666 94 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 GUCA2BQ16661 112 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 SPANXN5Q5MJ07 72 aa13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 PAIP2BQ9ULR5 123 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-216ENST00000506537 IGHV3OR16-13A0A075B7E8 117 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 IGHV3-74A0A0B4J1X5 117 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 FAM25EA8MYX2 175 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 INMT-MINDY4F8WBC2 141 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 CHEK1O14757 476 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 MBPP02686 304 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 CD7P09564 240 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 RAB11AP62491 216 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 GAMTQ14353 236 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 GINS3Q9BRX5 216 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 MARVELD1Q9BSK0 173 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 STRAPQ9Y3F4 350 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-216ENST00000506537 IGKV1D-37A0A075B6S9 117 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 TRAV14DV4A0A0A6YYC5 116 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 SCGB2A1O75556 95 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 APOHP02749 345 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 IGHV4-30-4P0DP06 118 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 CD81P60033 236 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 RPP30P78346 268 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 GTSCR1Q86UQ5 136 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 SLC35E1Q96K37 410 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 SMIM8Q96KF7 97 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 RNF2Q99496 336 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 PSENENQ9NZ42 101 aa13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 HUWE1Q7Z6Z7 4374 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-216ENST00000506537 C5orf51A6NDU8 294 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 LILRB2Q8N423 598 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 ST8SIA2Q92186 375 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 C2orf50Q96LR7 162 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 NEURL2Q9BR09 285 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 WFDC10AQ9H1F0 79 aa13.67□□□□□ -0.22
PDLIM7-216ENST00000506537 IGKV1OR2-108A0A075B7D4 117 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 PMS2P5A8MQ11 134 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 SNRPGP15A8MWD9 76 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 TSPAN4O14817 238 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 PRAF2O60831 178 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 CCNKO75909 580 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 TOMM40O96008 361 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 RBPMS2Q6ZRY4 209 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 RAB40CQ96S21 281 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 VSIRQ9H7M9 311 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 GPN1Q9HCN4 374 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 C19orf73Q9NVV2 129 aa13.66□□□□□ -0.22
PDLIM7-216ENST00000506537 IGHV3-66A0A0C4DH42 116 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 C7orf66A4D0T2 115 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 A8MZ25 164 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 K7EPK0 472 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 IL15RAQ13261 267 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 FAM90A2PQ658T7 463 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 TMEM14EPQ6UXP3 125 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 GSG1LQ6UXU4 331 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 ACOT7LQ6ZUV0 252 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 Q8WTZ3 238 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 ASCL2Q99929 193 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 C11orf1Q9H5F2 150 aa13.65□□□□□ -0.22
PDLIM7-216ENST00000506537 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 PSG1P11464 419 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 CRYBB3P26998 211 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 TAS2R30P59541 319 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 ZNF90Q03938 601 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 USF2Q15853 346 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 LAMTOR1Q6IAA8 161 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 THAP8Q8NA92 274 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 METTL26Q96S19 204 aa13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 SPAG8Q99932 426 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 LSM5Q9Y4Y9 91 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-216ENST00000506537 TSC22D2O75157 780 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 SIX6O95475 246 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 IL4P05112 153 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 METTL15P1P0C7V9 234 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 RD3LP0DJH9 198 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 NPPCP23582 126 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 U3KQE9 123 aa13.63□□□□□ -0.23
PDLIM7-216ENST00000506537 GOSR2O14653 212 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms