RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 Q8NDZ9 215 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 OR4D11Q8NGI4 311 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 SLC25A40Q8TBP6 338 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 NAT14Q8WUY8 206 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 FGF13Q92913 245 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TMEM203Q969S6 136 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 DNAJC30Q96LL9 226 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 IMMP2LQ96T52 175 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TCEAL7Q9BRU2 100 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TMEM70Q9BUB7 260 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 CCDC32Q9BV29 185 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 IMUPQ9GZP8 106 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 CHST6Q9GZX3 395 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TUBA4BQ9H853 241 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 NDUFB11Q9NX14 153 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TP73-AS1Q9UF72 201 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TNFSF18Q9UNG2 199 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 HHLA3Q9XRX5 114 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 CYSLTR1Q9Y271 337 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TIMM9Q9Y5J7 89 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 FMN1Q68DA7 1419 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 SETD5Q9C0A6 1442 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 ARAP1Q96P48 1450 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 WDR7Q9Y4E6 1490 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 TONSLQ96HA7 1378 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 ATG2BQ96BY7 2078 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 A0A096LPI6 279 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 VPS37CA5D8V6 355 aaPredicted RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 FAM25AB3EWG3 89 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 FAM25CB3EWG5 89 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 FAM25GB3EWG6 89 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 E7EQL1 145 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 F6UZH7 168 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 TRAPPC2LH3BP13 241 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 H3BQF6 201 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 BUB1B-PAK6H3BSN5 160 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 H7C1C5 153 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 H7C2G1 150 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 J3QRE1 110 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 CORTO00230 105 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 DEGS1O15121 323 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 GNG7O60262 68 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 FAM107AO95990 144 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 IFNA7P01567 189 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 HIST1H1BP16401 226 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 LGALS3P17931 250 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 RPL7P18124 248 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 CSRP1P21291 193 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 RPS4Y1P22090 263 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 RPS3P23396 243 aaKnown RBP eCLIP1.13□□□□□ -2.233e-7■■■□□ 16.5
LMNB1-207ENST00000494185 CCR2P41597 374 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 RPL28P46779 137 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 DEFA1P59665 94 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 YPEL3P61236 119 aaPredicted RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 NCALDP61601 193 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 PKIAP61925 76 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 LCN6P62502 163 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 HIST1H1AQ02539 215 aaPredicted RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF90Q03938 601 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF181Q2M3W8 571 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SCGB2B2Q4G0G5 96 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 Q5BKY6 102 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 LYRM7Q5U5X0 104 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 DCUN1D2Q6PH85 259 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 AGTRAPQ6RW13 159 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 LCA10Q71F78 164 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SLC35E3Q7Z769 313 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 DEFB128Q7Z7B8 93 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 C9orf62Q8N4C0 152 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 C10orf126Q8N4M7 172 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SLC30A7Q8NEW0 376 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 OR5C1Q8NGR4 320 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 TERB2Q8NHR7 220 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 DNAJC9Q8WXX5 260 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 MRPS24Q96EL2 167 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 CARD19Q96LW7 228 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 CCDC115Q96NT0 180 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SNHG12Q9BXW3 62 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 PBOV1Q9GZY1 135 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 ACER3Q9NUN7 267 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 PRO2289Q9P1D8 64 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 HSPB8Q9UJY1 196 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 GNG8Q9UK08 70 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SSR3Q9UNL2 185 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 ZFP30Q9Y2G7 519 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 U3KQ87 197 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 VPS8Q8N3P4 1428 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 YTHDC2Q9H6S0 1430 aaKnown RBP1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SHANK1Q9Y566 2161 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 BICRAQ9NZM4 1560 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 HIVEP2P31629 2446 aa1.13□□□□□ -2.23
LMNB1-207ENST00000494185 SLIT2O94813 1529 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 NISCHQ9Y2I1 1504 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TRAV41A0A0B4J266 112 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 IGHV1-18A0A0C4DH31 117 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 TRBV10-2A0A0K0K1G8 114 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 H3BT86 120 aa1.12□□□□□ -2.23
LMNB1-207ENST00000494185 M0R143 59 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms