RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PRSS54Q6PEW0 395 aa17.53■□□□□ 0.4
CTDSP1-211ENST00000492545 TENM2Q9NT68 2774 aa17.53■□□□□ 0.4
CTDSP1-211ENST00000492545 SPRY2O43597 315 aa17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 APOHP02749 345 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 CRYBB3P26998 211 aa17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 TFPI2P48307 235 aa17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 YPEL3P61236 119 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 TMED4Q7Z7H5 227 aa17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 Q8WTZ3 238 aa17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 PRR13Q9NZ81 148 aa17.52■□□□□ 0.4
CTDSP1-211ENST00000492545 IGKV3-7A0A075B6H7 116 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 DNASE2O00115 360 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 IFNA10P01566 189 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 IGLC1P0CG04 106 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 RPL11P62913 178 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 GBGT1Q8N5D6 347 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 LRTM2Q8N967 370 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 MS4A6AQ9H2W1 248 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 MAP6D1Q9H9H5 199 aa17.51■□□□□ 0.39
CTDSP1-211ENST00000492545 LCE6AA0A183 80 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 OR10J1P30954 320 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 RND2P52198 227 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 TIGITQ495A1 244 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 APRG1Q8IVJ8 170 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 LILRB2Q8N423 598 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 DTD1Q8TEA8 209 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 TMEM170AQ8WVE7 144 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 GRAMD2BQ96HH9 432 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 CSMD3Q7Z407 3707 aa17.5■□□□□ 0.39
CTDSP1-211ENST00000492545 SLC25A6P12236 298 aa17.49■□□□□ 0.39
CTDSP1-211ENST00000492545 EIF2B2P49770 351 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-211ENST00000492545 OR1S1Q8NH92 325 aa17.49■□□□□ 0.39
CTDSP1-211ENST00000492545 RNF183Q96D59 192 aa17.49■□□□□ 0.39
CTDSP1-211ENST00000492545 CSTL1Q9H114 145 aa17.49■□□□□ 0.39
CTDSP1-211ENST00000492545 IGHV3-66A0A0C4DH42 116 aa17.48■□□□□ 0.39
CTDSP1-211ENST00000492545 NXPH3O95157 252 aa17.48■□□□□ 0.39
CTDSP1-211ENST00000492545 RPL35AP18077 110 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-211ENST00000492545 RBKSQ9H477 322 aa17.48■□□□□ 0.39
CTDSP1-211ENST00000492545 ATF4P18848 351 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 VAMP1P23763 118 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 P2RY1P47900 373 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 DEFB135Q30KP9 77 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 NPIPB3Q92617 1050 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 SRRQ9GZT4 340 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 TMED3Q9Y3Q3 217 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 U3KQE9 123 aa17.47■□□□□ 0.39
CTDSP1-211ENST00000492545 NAP1L6A6NFF2 107 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 MPTX1A8MV57 137 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 FAM90A26D6RGX4 464 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 PITX3O75364 302 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 IFNA4P05014 189 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 GPX4P36969 197 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 AP2S1P53680 142 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 UBE2MP61081 183 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 RBMS2Q15434 407 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 CENPSQ8N2Z9 138 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 STARD9Q9P2P6 4700 aa17.46■□□□□ 0.39
CTDSP1-211ENST00000492545 DYNC2H1Q8NCM8 4307 aaKnown RBP17.46■□□□□ 0.38
CTDSP1-211ENST00000492545 HELTA6NFD8 242 aa17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 MED6O75586 246 aa17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 SFT2D2O95562 160 aa17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 HNRNPCP07910 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 RD3LP0DJH9 198 aa17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 INPP1P49441 399 aa17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 RABAC1Q9UI14 185 aa17.45■□□□□ 0.38
CTDSP1-211ENST00000492545 TOMM40O96008 361 aa17.44■□□□□ 0.38
CTDSP1-211ENST00000492545 TMEM217Q8N7C4 229 aa17.44■□□□□ 0.38
CTDSP1-211ENST00000492545 GATAD1Q8WUU5 269 aa17.44■□□□□ 0.38
CTDSP1-211ENST00000492545 ACY3Q96HD9 319 aa17.44■□□□□ 0.38
CTDSP1-211ENST00000492545 K7EQG2 157 aa17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 DEFB131AP59861 70 aa17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 PPP1R1AQ13522 171 aa17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 TRIQKQ629K1 86 aa17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 LYG2Q86SG7 212 aa17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 CIB3Q96Q77 187 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 PFDN2Q9UHV9 154 aa17.43■□□□□ 0.38
CTDSP1-211ENST00000492545 IL4P05112 153 aa17.42■□□□□ 0.38
CTDSP1-211ENST00000492545 RAB11AP62491 216 aa17.42■□□□□ 0.38
CTDSP1-211ENST00000492545 RPP30P78346 268 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-211ENST00000492545 ZNF124Q15973 351 aa17.42■□□□□ 0.38
CTDSP1-211ENST00000492545 STXBP6Q8NFX7 210 aa17.42■□□□□ 0.38
CTDSP1-211ENST00000492545 A0A0J9YWU9 116 aa17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 JTBO76095 146 aa17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 FABP1P07148 127 aa17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 NUP62P37198 522 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 C16orf54Q6UWD8 224 aa17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 SLC35E1Q96K37 410 aa17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 NDUFA13Q9P0J0 144 aa17.41■□□□□ 0.38
CTDSP1-211ENST00000492545 CENPXA8MT69 81 aa17.4■□□□□ 0.38
CTDSP1-211ENST00000492545 PSG1P11464 419 aa17.4■□□□□ 0.38
CTDSP1-211ENST00000492545 STHQ8IWL8 128 aa17.4■□□□□ 0.38
CTDSP1-211ENST00000492545 OR51G1Q8NGK1 321 aa17.4■□□□□ 0.38
CTDSP1-211ENST00000492545 DCANP1Q8TF63 244 aa17.4■□□□□ 0.38
CTDSP1-211ENST00000492545 GLMPQ8WWB7 406 aa17.4■□□□□ 0.38
CTDSP1-211ENST00000492545 SACSQ9NZJ4 4579 aa17.39■□□□□ 0.37
CTDSP1-211ENST00000492545 NDUFB6O95139 128 aa17.39■□□□□ 0.37
CTDSP1-211ENST00000492545 GAMTQ14353 236 aa17.39■□□□□ 0.37
CTDSP1-211ENST00000492545 USF2Q15853 346 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-211ENST00000492545 BAK1Q16611 211 aa17.39■□□□□ 0.37
CTDSP1-211ENST00000492545 SEPSECSQ9HD40 501 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms