RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RNF11Q9Y3C5 154 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 IGLV10-54A0A075B6I4 117 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TRAV41A0A0B4J266 112 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 ARRDC5A6NEK1 342 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 OR2AT4A6NND4 320 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 CENPXA8MT69 81 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 H3BQ85 93 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 K7ERS5 55 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 ZNF701M0R085 212 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 FAAHO00519 579 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TCAPO15273 167 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 OR2T1O43869 369 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 MPZL2O60487 215 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 GMDSO60547 372 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 OR2A4O95047 310 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 CDS2O95674 445 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 COX5BP10606 129 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 GPR4P46093 362 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 LGALS7P47929 136 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TPPP2P59282 170 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 PCBD1P61457 104 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 C2orf80Q0P641 193 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 ENDOGQ14249 297 aaKnown RBP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 ACOT6Q3I5F7 207 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 CDNFQ49AH0 187 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 PLCXD3Q63HM9 321 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 KDM4DQ6B0I6 523 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TMEM144Q7Z5S9 345 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 Q8NDZ9 215 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 OR6K6Q8NGW6 343 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 CASTOR1Q8WTX7 329 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 APOBEC3DQ96AK3 386 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 SLC25A44Q96H78 314 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TEX37Q96LM6 180 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 PPP1R36Q96LQ0 422 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 SDF2Q99470 211 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 DERL2Q9GZP9 239 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TMEM133Q9H2Q1 129 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 GOLPH3Q9H4A6 298 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 ARMC7Q9H6L4 198 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 WDR55Q9H6Y2 383 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 TAS2R7Q9NYW3 318 aa1.76□□□□□ -2.13
ITGB1-214ENST00000488427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.76□□□□□ -2.13
ITGB1-214ENST00000488427 A0A087WUJ7 227 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 A0A087X0T9 212 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 TRAV25A0A0B4J276 109 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 A0A1W2PRG6 482 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 SUPT3HB4E1H0 165 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 ENTPD6O75354 484 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 HAND1O96004 215 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 GCGP01275 180 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 C1QCP02747 245 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 CST2P09228 141 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 FAM228BP0C875 321 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 HTN3P15516 51 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 MARCKSL1P49006 195 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 COPZ1P61923 177 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 BASP1P80723 227 aaKnown RBP1.75□□□□□ -2.13
ITGB1-214ENST00000488427 ST3GAL4Q11206 333 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 OR4D1Q15615 310 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 SLC35D2Q76EJ3 337 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 TCF23Q7RTU1 214 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 FAM122BQ7Z309 247 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 OFCC1Q8IZS5 231 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 C4orf33Q8N1A6 199 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 EIF4E3Q8N5X7 224 aaKnown RBP1.75□□□□□ -2.13
ITGB1-214ENST00000488427 TCTEX1D1Q8N7M0 179 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 CYB561A3Q8NBI2 242 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 HAVCR2Q8TDQ0 301 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 TCP10LQ8TDR4 215 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 ISOC2Q96AB3 205 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 ZNF714Q96N38 554 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 RHOFQ9HBH0 211 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 VPS29Q9UBQ0 182 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 PRO0628Q9UI54 55 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 PYCARDQ9ULZ3 195 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
ITGB1-214ENST00000488427 TRAV3A0A0B4J244 114 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 BUB1B-PAK6H3BSN5 160 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 TEX46H3BTG2 121 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 BHLHE40O14503 412 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 TOR1AO14656 332 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 POLR3GO15318 223 aaPredicted RBP1.74□□□□□ -2.13
ITGB1-214ENST00000488427 SGCEO43556 437 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 NDUFS5O43920 106 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 SEC11BP0C7V7 166 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 MSR1P21757 451 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 BGNP21810 368 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 CD40LGP29965 261 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 GUCA1AP43080 201 aaPredicted RBP1.74□□□□□ -2.13
ITGB1-214ENST00000488427 SLC18A1P54219 525 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 HLA-DRB5Q30154 266 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 SPIN4Q56A73 249 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 C10orf128Q5T292 105 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 IDNKQ5T6J7 187 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 FAM27BQ5VT28 67 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 C5orf46Q6UWT4 87 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 SSX7Q7RTT5 188 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms