RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SLC24A4Q8NFF2 622 aa18.77■□□□□ 0.6
HLA-F-227ENST00000485513 OR1S2Q8NGQ3 325 aa18.77■□□□□ 0.6
HLA-F-227ENST00000485513 RNASEH2CQ8TDP1 164 aaKnown RBP18.77■□□□□ 0.6
HLA-F-227ENST00000485513 PRRT1Q99946 306 aa18.77■□□□□ 0.6
HLA-F-227ENST00000485513 RABL2AQ9UBK7 228 aaPredicted RBP18.77■□□□□ 0.6
HLA-F-227ENST00000485513 FBXL17Q9UF56 701 aa18.77■□□□□ 0.6
HLA-F-227ENST00000485513 RABL2BQ9UNT1 228 aa18.77■□□□□ 0.6
HLA-F-227ENST00000485513 IGLC1P0CG04 106 aa18.76■□□□□ 0.59
HLA-F-227ENST00000485513 RBMS2Q15434 407 aaKnown RBP18.76■□□□□ 0.59
HLA-F-227ENST00000485513 CLVS1Q8IUQ0 354 aaPredicted RBP18.76■□□□□ 0.59
HLA-F-227ENST00000485513 OR51S1Q8NGJ8 323 aa18.76■□□□□ 0.59
HLA-F-227ENST00000485513 TMEM56-RWDD3S4R434 201 aa18.76■□□□□ 0.59
HLA-F-227ENST00000485513 DEFB4AO15263 64 aa18.75■□□□□ 0.59
HLA-F-227ENST00000485513 ZNF688P0C7X2 276 aa18.75■□□□□ 0.59
HLA-F-227ENST00000485513 OR10J1P30954 320 aa18.75■□□□□ 0.59
HLA-F-227ENST00000485513 Q8WTZ3 238 aa18.75■□□□□ 0.59
HLA-F-227ENST00000485513 CCDC59Q9P031 241 aaKnown RBP18.75■□□□□ 0.59
HLA-F-227ENST00000485513 U3KQE9 123 aa18.75■□□□□ 0.59
HLA-F-227ENST00000485513 IFNA4P05014 189 aa18.74■□□□□ 0.59
HLA-F-227ENST00000485513 EIF2B2P49770 351 aaKnown RBP18.74■□□□□ 0.59
HLA-F-227ENST00000485513 YPEL3P61236 119 aaPredicted RBP18.74■□□□□ 0.59
HLA-F-227ENST00000485513 TRPT1Q86TN4 253 aaKnown RBP18.74■□□□□ 0.59
HLA-F-227ENST00000485513 DCANP1Q8TF63 244 aa18.74■□□□□ 0.59
HLA-F-227ENST00000485513 RAB2BQ8WUD1 216 aa18.74■□□□□ 0.59
HLA-F-227ENST00000485513 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
HLA-F-227ENST00000485513 KCNIP3Q9Y2W7 256 aa18.74■□□□□ 0.59
HLA-F-227ENST00000485513 NXPH3O95157 252 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 HNRNPCP07910 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
HLA-F-227ENST00000485513 SULT1A3P0DMM9 295 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 SULT1A4P0DMN0 295 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 NPY1RP25929 384 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 TMEM41BQ5BJD5 291 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 ETFRF1Q6IPR1 90 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 DYNC2LI1Q8TCX1 351 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 TMEM170AQ8WVE7 144 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 IL22RA2Q969J5 263 aa18.73■□□□□ 0.59
HLA-F-227ENST00000485513 ANKRD20A5PA0PJZ0 165 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 HELTA6NFD8 242 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 KNCNA6PVL3 124 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 GIG44P09565 113 aaPredicted RBP18.72■□□□□ 0.59
HLA-F-227ENST00000485513 SPP1P10451 314 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 LGALS9CQ6DKI2 356 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 MORN3Q6PF18 240 aaPredicted RBP18.72■□□□□ 0.59
HLA-F-227ENST00000485513 C16orf54Q6UWD8 224 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 NOXA1Q86UR1 476 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 SCP2D1Q9UJQ7 156 aa18.72■□□□□ 0.59
HLA-F-227ENST00000485513 GSTZ1O43708 216 aaPredicted RBP18.71■□□□□ 0.59
HLA-F-227ENST00000485513 DHRS2Q13268 280 aa18.71■□□□□ 0.59
HLA-F-227ENST00000485513 NMSQ5H8A3 153 aa18.71■□□□□ 0.59
HLA-F-227ENST00000485513 RPP25LQ8N5L8 163 aaKnown RBP18.71■□□□□ 0.59
HLA-F-227ENST00000485513 GLMPQ8WWB7 406 aa18.71■□□□□ 0.59
HLA-F-227ENST00000485513 NPIPB3Q92617 1050 aa18.71■□□□□ 0.59
HLA-F-227ENST00000485513 PRR13Q9NZ81 148 aa18.71■□□□□ 0.59
HLA-F-227ENST00000485513 IL4P05112 153 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 AP2S1P53680 142 aaPredicted RBP18.7■□□□□ 0.58
HLA-F-227ENST00000485513 KMT2AQ03164 3969 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 ACTL10Q5JWF8 245 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 Q8NAQ8 132 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 ACY3Q96HD9 319 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 SCGB3A2Q96PL1 93 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 BCL7BQ9BQE9 202 aa18.7■□□□□ 0.58
HLA-F-227ENST00000485513 RSL24D1Q9UHA3 163 aaKnown RBP18.7■□□□□ 0.58
HLA-F-227ENST00000485513 TMBIM6P55061 237 aa18.69■□□□□ 0.58
HLA-F-227ENST00000485513 USF2Q15853 346 aaPredicted RBP18.69■□□□□ 0.58
HLA-F-227ENST00000485513 MCUBQ9NWR8 336 aa18.69■□□□□ 0.58
HLA-F-227ENST00000485513 DEDDO75618 318 aa18.68■□□□□ 0.58
HLA-F-227ENST00000485513 IFNA10P01566 189 aa18.68■□□□□ 0.58
HLA-F-227ENST00000485513 C4BPBP20851 252 aa18.68■□□□□ 0.58
HLA-F-227ENST00000485513 C2CD4CQ8TF44 421 aa18.68■□□□□ 0.58
HLA-F-227ENST00000485513 A0A0B4J2A0 478 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 IGHV4-28A0A0C4DH34 117 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 TOMM40O96008 361 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 RD3LP0DJH9 198 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 AKR1C4P17516 323 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 CCR6P51684 374 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 SMCO1Q147U7 214 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 PSMG4Q5JS54 123 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 RAB40CQ96S21 281 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 HSPB7Q9UBY9 170 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 SHPKQ9UHJ6 478 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 U3KQ87 197 aa18.67■□□□□ 0.58
HLA-F-227ENST00000485513 RBMY1A1P0DJD3 496 aaKnown RBP18.66■□□□□ 0.58
HLA-F-227ENST00000485513 RBMY1CP0DJD4 496 aa18.66■□□□□ 0.58
HLA-F-227ENST00000485513 MIFP14174 115 aa18.66■□□□□ 0.58
HLA-F-227ENST00000485513 SUPT4H1P63272 117 aaKnown RBP18.66■□□□□ 0.58
HLA-F-227ENST00000485513 RBMY1FQ15415 496 aaKnown RBP18.66■□□□□ 0.58
HLA-F-227ENST00000485513 LYZL2Q7Z4W2 148 aa18.66■□□□□ 0.58
HLA-F-227ENST00000485513 DTD1Q8TEA8 209 aa18.66■□□□□ 0.58
HLA-F-227ENST00000485513 HRH4Q9H3N8 390 aa18.66■□□□□ 0.58
HLA-F-227ENST00000485513 ZNF705EA8MWA4 302 aaPredicted RBP18.65■□□□□ 0.58
HLA-F-227ENST00000485513 LGI3Q8N145 548 aa18.65■□□□□ 0.58
HLA-F-227ENST00000485513 SLIRPQ9GZT3 109 aaKnown RBP18.65■□□□□ 0.58
HLA-F-227ENST00000485513 RBKSQ9H477 322 aa18.65■□□□□ 0.58
HLA-F-227ENST00000485513 FABP12A6NFH5 140 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 FAM90A26D6RGX4 464 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 BUB3O43684 328 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 NOL3O60936 208 aaKnown RBP18.64■□□□□ 0.57
HLA-F-227ENST00000485513 PSG1P11464 419 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 ANXA3P12429 323 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 TNFSF8P32971 234 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms