RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 RPS10-NUDT3A0A1W2PQS6 291 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 CTDSP2O14595 271 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 MEF2DQ14814 521 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 ACTL10Q5JWF8 245 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 PRSS54Q6PEW0 395 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 FAM219AQ8IW50 185 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 OR52E5Q8NH55 327 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 RBPMSQ93062 196 aaKnown RBP13.68□□□□□ -0.22
ABCF3-214ENST00000480562 U3KQE9 123 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 CEBPZOSA8MTT3 80 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 IGLL5B9A064 214 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 RGS5O15539 181 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 NXPH3O95157 252 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 DHRS2Q13268 280 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 C2orf83Q53S99 150 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 MORN3Q6PF18 240 aaPredicted RBP13.67□□□□□ -0.22
ABCF3-214ENST00000480562 OR1S2Q8NGQ3 325 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 Q8WTZ3 238 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 TMEM170AQ8WVE7 144 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 CLEC5AQ9NY25 188 aa13.67□□□□□ -0.22
ABCF3-214ENST00000480562 DISC1C4P0D8 188 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 SPP1P10451 314 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 OR10J1P30954 320 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 DHODHQ02127 395 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 SSBP1Q04837 148 aaKnown RBP13.66□□□□□ -0.22
ABCF3-214ENST00000480562 TMEM268Q5VZI3 342 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 C16orf54Q6UWD8 224 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 SLC24A4Q8NFF2 622 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 GLMPQ8WWB7 406 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 APLNQ9ULZ1 77 aa13.66□□□□□ -0.22
ABCF3-214ENST00000480562 HELTA6NFD8 242 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 HNRNPCP07910 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
ABCF3-214ENST00000480562 SLC25A4P12235 298 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 EIF2B2P49770 351 aaKnown RBP13.65□□□□□ -0.22
ABCF3-214ENST00000480562 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 PSMG4Q5JS54 123 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 OR4C16Q8NGL9 310 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 RNASEH2CQ8TDP1 164 aaKnown RBP13.65□□□□□ -0.22
ABCF3-214ENST00000480562 RAB40CQ96S21 281 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 HRH4Q9H3N8 390 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 GPR132Q9UNW8 380 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 X6R8D5 127 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 HERC2O95714 4834 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 HECTD4Q9Y4D8 3996 aa13.65□□□□□ -0.22
ABCF3-214ENST00000480562 CRYM-AS1A6NIL9 109 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
ABCF3-214ENST00000480562 MIFP14174 115 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 TCTAP57738 103 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 YPEL3P61236 119 aaPredicted RBP13.64□□□□□ -0.23
ABCF3-214ENST00000480562 MRPS10P82664 201 aaKnown RBP13.64□□□□□ -0.23
ABCF3-214ENST00000480562 SPCS2Q15005 226 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 SURF2Q15527 256 aaPredicted RBP13.64□□□□□ -0.23
ABCF3-214ENST00000480562 USF2Q15853 346 aaPredicted RBP13.64□□□□□ -0.23
ABCF3-214ENST00000480562 SMIM4Q8WVI0 70 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 NPIPB3Q92617 1050 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 ACY3Q96HD9 319 aa13.64□□□□□ -0.23
ABCF3-214ENST00000480562 ELOA3CA0A087WX78 387 aaPredicted RBP13.63□□□□□ -0.23
ABCF3-214ENST00000480562 C11orf94C9JXX5 98 aa13.63□□□□□ -0.23
ABCF3-214ENST00000480562 IL4P05112 153 aa13.63□□□□□ -0.23
ABCF3-214ENST00000480562 AKAIN1P0CW23 69 aa13.63□□□□□ -0.23
ABCF3-214ENST00000480562 CSNK1G2-AS1Q8NCQ2 148 aa13.63□□□□□ -0.23
ABCF3-214ENST00000480562 TBC1D24Q9ULP9 559 aa13.63□□□□□ -0.23
ABCF3-214ENST00000480562 TMEM56-RWDD3S4R434 201 aa13.63□□□□□ -0.23
ABCF3-214ENST00000480562 NPY1RP25929 384 aa13.62□□□□□ -0.23
ABCF3-214ENST00000480562 AP2S1P53680 142 aaPredicted RBP13.62□□□□□ -0.23
ABCF3-214ENST00000480562 IL18Q14116 193 aa13.62□□□□□ -0.23
ABCF3-214ENST00000480562 Q6ZTC4 211 aa13.62□□□□□ -0.23
ABCF3-214ENST00000480562 OR51S1Q8NGJ8 323 aa13.62□□□□□ -0.23
ABCF3-214ENST00000480562 RD3LP0DJH9 198 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 SULT1A3P0DMM9 295 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 SULT1A4P0DMN0 295 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 ETFRF1Q6IPR1 90 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 GPR141Q7Z602 305 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 CLVS1Q8IUQ0 354 aaPredicted RBP13.61□□□□□ -0.23
ABCF3-214ENST00000480562 DIRAS2Q96HU8 199 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 PRRT1Q99946 306 aa13.61□□□□□ -0.23
ABCF3-214ENST00000480562 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 TOMM40O96008 361 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 IFNA10P01566 189 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 ALDH3B2P48448 385 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 NMSQ5H8A3 153 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 ZNF767PQ75MW2 155 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 OR51G1Q8NGK1 321 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 DNAH2Q9P225 4427 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 CELA1Q9UNI1 258 aa13.6□□□□□ -0.23
ABCF3-214ENST00000480562 TRAV10A0A0B4J240 114 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 CTDSPLO15194 276 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 BUB3O43684 328 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 PSG1P11464 419 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 SNRPD3P62318 126 aaKnown RBP13.59□□□□□ -0.23
ABCF3-214ENST00000480562 SIGLEC15Q6ZMC9 328 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 NOXA1Q86UR1 476 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 IL22RA2Q969J5 263 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
ABCF3-214ENST00000480562 KRTAP17-1Q9BYP8 105 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 XCL2Q9UBD3 114 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms