RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	EIF2B2	P49770	351 aa	Known RBP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	MEOX2	P50222	304 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	AP2S1	P53680	142 aa	Predicted RBP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	SLURP1	P55000	103 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	PAX9	P55771	341 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	SYNJ2BP	P57105	145 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	POLR2G	P62487	172 aa	Known RBP eCLIP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	HBG1	P69891	147 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	HBG2	P69892	147 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	FGL1	Q08830	312 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	GAMT	Q14353	236 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	CLEC19A	Q6UXS0	136 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	SLC16A13	Q7RTY0	426 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	UBAC2	Q8NBM4	344 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR10P1	Q8NGE3	313 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR51G1	Q8NGK1	321 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	MISP3	Q96FF7	219 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZNF414	Q96IQ9	312 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	SLC35E1	Q96K37	410 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	GPR82	Q96P67	336 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	CHRDL1	Q9BU40	450 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	NPVF	Q9HCQ7	196 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	KCNIP2	Q9NS61	270 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	FBXL17	Q9UF56	701 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	LSM4	Q9Y4Z0	139 aa	Known RBP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	TRAV14DV4	A0A0A6YYC5	116 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGHV7-4-1	A0A0J9YVY3	117 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	LINC00854	A0A1B0GVQ3	168 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	WI2-2373I1.2	A0A1W2PRP0	233 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	ANKRD34B	A5PLL1	514 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	HELT	A6NFD8	242 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR2T8	A6NH00	312 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	SAP30	O75446	220 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	DFFB	O76075	338 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	IFNA4	P05014	189 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	GIP	P09681	153 aa	Predicted RBP	3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	FOLR2	P14207	255 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGLL1	P15814	213 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR10J1	P30954	320 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	SULT1A1	P50225	295 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	H2BFS	P57053	126 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	RAP2B	P61225	183 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	DEFB114	Q30KQ6	69 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525		Q56UQ5	140 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	OXLD1	Q5BKU9	147 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	FAM90A2P	Q658T7	463 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	LAMTOR1	Q6IAA8	161 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	STX12	Q86Y82	276 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR52B4	Q8NGK2	314 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525		Q8WTZ3	238 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	GRAMD2B	Q96HH9	432 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	NARS2	Q96I59	477 aa	Known RBP	3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	CLUHP3	Q96NS8	147 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	SEC22C	Q9BRL7	303 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	SLC25A31	Q9H0C2	315 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	PSENEN	Q9NZ42	101 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	PRR13	Q9NZ81	148 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	SMPX	Q9UHP9	88 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	STAB2	Q8WWQ8	2551 aa		3.85	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGKV1D-37	A0A075B6S9	117 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGKV1OR2-108	A0A075B7D4	117 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	ELOA3C	A0A087WX78	387 aa	Predicted RBP	3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	C5orf51	A6NDU8	294 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR4C46	A6NHA9	309 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	PPP5D1	E7EU14	171 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525		G3V4G9	280 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525		L7N2F9	121 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	CHEK1	O14757	476 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	BUB3	O43684	328 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	SSSCA1	O60232	199 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	MPC2	O95563	127 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	NHLRC4	P0CG21	123 aa	Predicted RBP	3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	RD3L	P0DJH9	198 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	GP9	P14770	177 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	CXCL2	P19875	107 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	NPPC	P23582	126 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	RND2	P52198	227 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	RRAS2	P62070	204 aa	Predicted RBP	3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	VAMP2	P63027	116 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	RAB31	Q13636	194 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM41B	Q5BJD5	291 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	TEPP	Q6URK8	271 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	C16orf54	Q6UWD8	224 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	TOMM20L	Q6UXN7	152 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	UNQ9165/PRO28630	Q6UXU0	137 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	ADAMTSL5	Q6ZMM2	481 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	C19orf35	Q6ZS72	473 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	ACOT7L	Q6ZUV0	252 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZNF546	Q86UE3	836 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	LILRB2	Q8N423	598 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM252	Q8N6L7	170 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	STPG3	Q8N7X2	389 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	BPIFC	Q8NFQ6	507 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	PPP1R1C	Q8WVI7	109 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	RNF125	Q96EQ8	232 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR5B12	Q96R08	314 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	METTL26	Q96S19	204 aa		3.84	□□□□□ -1.79
HDAC6-223	ENST00000480525	B9D2	Q9BPU9	175 aa		3.84	□□□□□ -1.79

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