RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CYP2G1PQ6ZSU1 146 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 ABHD12Q8N2K0 398 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 JPT2Q9H910 190 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 JPT1Q9UK76 154 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 A0A0G2JLM5 398 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
U2AF1-209ENST00000475639 ZNF726P1Q15940 193 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 SFTA2Q6UW10 78 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 CIARTQ8N365 385 aaPredicted RBP9.7□□□□□ -0.86
U2AF1-209ENST00000475639 OR4X2Q8NGF9 303 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
U2AF1-209ENST00000475639 PRSS47A8MTI9 375 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 RPRMQ9NS64 109 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 SHANK1Q9Y566 2161 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 PEX7O00628 323 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 PMS2CLQ68D20 193 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 IFI6P09912 130 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 EGR1P18146 543 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 PSG4Q00888 419 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 TBR1Q16650 682 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 DLL3Q9NYJ7 618 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 MYO7BQ6PIF6 2116 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 A0A0J9YW62 118 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 TOMM40O96008 361 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 PTGDSP41222 190 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 ST6GALNAC6Q969X2 333 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 MGST2Q99735 147 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 CLEC7AQ9BXN2 247 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 IGKV1D-43A0A0B4J1Z2 117 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV1OR15-9A0A0B4J2B8 117 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 KBTBD11-OT1A0A1B0GTJ5 212 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 AHRRA9YTQ3 701 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 NAPSAO96009 420 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 RPL15P61313 204 aaKnown RBP9.69□□□□□ -0.86
U2AF1-209ENST00000475639 LY6EQ16553 131 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 C1orf210Q8IVY1 113 aa9.69□□□□□ -0.86
U2AF1-209ENST00000475639 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 CTSBP07858 339 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 PLPPR1Q8TBJ4 325 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 AGMATQ9BSE5 352 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 IL36BQ9NZH7 164 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 FOXH1O75593 365 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 ZNF48Q96MX3 618 aaPredicted RBP9.68□□□□□ -0.86
U2AF1-209ENST00000475639 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 IGKV1-9A0A0C4DH69 117 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 TRGV3P03979 118 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 CRIP3Q6Q6R5 217 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 WDR54Q9H977 334 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 ATP5J2P56134 94 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 ZP4Q12836 540 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 ZNF826PQ6ZT77 177 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 ITLN2Q8WWU7 325 aaPredicted RBP9.68□□□□□ -0.86
U2AF1-209ENST00000475639 WDYHV1Q96HA8 205 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
U2AF1-209ENST00000475639 NPCDR1Q9BY65 106 aa9.68□□□□□ -0.86
U2AF1-209ENST00000475639 PGPEP1LA6NFU8 196 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 CXCL10P02778 98 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 LINC00310P59036 64 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 TIMM23BQ5SRD1 257 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 MORN3Q6PF18 240 aaPredicted RBP9.67□□□□□ -0.86
U2AF1-209ENST00000475639 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 FLVCR1-AS1Q8TAF5 88 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 TP53TG3Q9ULZ0 132 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 CDH23Q9H251 3354 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV4-39P01824 125 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
U2AF1-209ENST00000475639 FER1L6-AS1Q8NA97 138 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV3-48P01763 117 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
U2AF1-209ENST00000475639 LOXL4Q96JB6 756 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 SLC25A2Q9BXI2 301 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 PCNX2A6NKB5 2137 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 TRAV9-1A0A075B6T8 112 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 PRR19A6NJB7 356 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 PRR33A8MZF0 331 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 NDUFA3O95167 84 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 LDLRAD2Q5SZI1 272 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 ZFAND6Q6FIF0 208 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
U2AF1-209ENST00000475639 MYO18BQ8IUG5 2567 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 DXOO77932 396 aaKnown RBP9.66□□□□□ -0.86
U2AF1-209ENST00000475639 HBDP02042 147 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 SELENOHQ8IZQ5 122 aaKnown RBP9.66□□□□□ -0.86
U2AF1-209ENST00000475639 JMJD8Q96S16 334 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 SEPSECSQ9HD40 501 aaKnown RBP9.66□□□□□ -0.86
U2AF1-209ENST00000475639 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 REG1AP05451 166 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
U2AF1-209ENST00000475639 Q8NFD4 153 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 LINC01587Q99440 93 aa9.66□□□□□ -0.86
U2AF1-209ENST00000475639 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms