RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ACY3Q96HD9 319 aa8.73□□□□□ -1.01
SMPD4-217ENST00000473720 GRAMD2BQ96HH9 432 aa8.73□□□□□ -1.01
SMPD4-217ENST00000473720 MCUBQ9NWR8 336 aa8.73□□□□□ -1.01
SMPD4-217ENST00000473720 CLEC5AQ9NY25 188 aa8.73□□□□□ -1.01
SMPD4-217ENST00000473720 GPR132Q9UNW8 380 aa8.73□□□□□ -1.01
SMPD4-217ENST00000473720 TRAV2A0A0B4J234 112 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 IFNA10P01566 189 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 IL4P05112 153 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 HNRNPCP07910 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMPD4-217ENST00000473720 AKR1C4P17516 323 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 NPY1RP25929 384 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 ALDH3B2P48448 385 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 BSXQ3C1V8 233 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 C2orf83Q53S99 150 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 PRSS54Q6PEW0 395 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 OR1S2Q8NGQ3 325 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 OR52E5Q8NH55 327 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 NPIPB3Q92617 1050 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 PRRT1Q99946 306 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
SMPD4-217ENST00000473720 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
SMPD4-217ENST00000473720 IGLC1P0CG04 106 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 SULT1A3P0DMM9 295 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 SULT1A4P0DMN0 295 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 SLC25A4P12235 298 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 C4BPBP20851 252 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 EIF2B2P49770 351 aaKnown RBP8.71□□□□□ -1.02
SMPD4-217ENST00000473720 SURF2Q15527 256 aaPredicted RBP8.71□□□□□ -1.02
SMPD4-217ENST00000473720 PSMG4Q5JS54 123 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
SMPD4-217ENST00000473720 DCANP1Q8TF63 244 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 KCNIP3Q9Y2W7 256 aa8.71□□□□□ -1.02
SMPD4-217ENST00000473720 HELTA6NFD8 242 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 IGLL5B9A064 214 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 NOL3O60936 208 aaKnown RBP8.7□□□□□ -1.02
SMPD4-217ENST00000473720 PLECQ15149 4684 aaKnown RBP8.7□□□□□ -1.02
SMPD4-217ENST00000473720 USF2Q15853 346 aaPredicted RBP8.7□□□□□ -1.02
SMPD4-217ENST00000473720 ETFRF1Q6IPR1 90 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 C16orf54Q6UWD8 224 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 DYNC2LI1Q8TCX1 351 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 RNASEH2CQ8TDP1 164 aaKnown RBP8.7□□□□□ -1.02
SMPD4-217ENST00000473720 C2CD4CQ8TF44 421 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 TMEM170AQ8WVE7 144 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 CCDC59Q9P031 241 aaKnown RBP8.7□□□□□ -1.02
SMPD4-217ENST00000473720 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
SMPD4-217ENST00000473720 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 ANKRD20A5PA0PJZ0 165 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 CTDSPLO15194 276 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RD3LP0DJH9 198 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 SPP1P10451 314 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 YPEL3P61236 119 aaPredicted RBP8.69□□□□□ -1.02
SMPD4-217ENST00000473720 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
SMPD4-217ENST00000473720 AARDQ4LEZ3 155 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 LGALS9CQ6DKI2 356 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
SMPD4-217ENST00000473720 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 Q8NAQ8 132 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 OR51G1Q8NGK1 321 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 OR1S1Q8NH92 325 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 DTD1Q8TEA8 209 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RAB2BQ8WUD1 216 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 GLMPQ8WWB7 406 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RAB40CQ96S21 281 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 PBDC1Q9BVG4 233 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 RBKSQ9H477 322 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 PAIP2BQ9ULR5 123 aaKnown RBP8.69□□□□□ -1.02
SMPD4-217ENST00000473720 TMEM56-RWDD3S4R434 201 aa8.69□□□□□ -1.02
SMPD4-217ENST00000473720 FABP12A6NFH5 140 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 TOMM40O96008 361 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 AP2S1P53680 142 aaPredicted RBP8.68□□□□□ -1.02
SMPD4-217ENST00000473720 GSG1LQ6UXU4 331 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 SIGLEC15Q6ZMC9 328 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 ZNF767PQ75MW2 155 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 TMED4Q7Z7H5 227 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 NOXA1Q86UR1 476 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 LGI3Q8N145 548 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 CENPSQ8N2Z9 138 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 SCGB3A2Q96PL1 93 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 U3KQE9 123 aa8.68□□□□□ -1.02
SMPD4-217ENST00000473720 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 FAM90A26D6RGX4 464 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 GSTZ1O43708 216 aaPredicted RBP8.67□□□□□ -1.02
SMPD4-217ENST00000473720 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 PSG1P11464 419 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 ANXA3P12429 323 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 MIFP14174 115 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 TNFSF8P32971 234 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 CCR6P51684 374 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 TMBIM6P55061 237 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 FXYD7P58549 80 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 SNRPD3P62318 126 aaKnown RBP8.67□□□□□ -1.02
SMPD4-217ENST00000473720 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 NMSQ5H8A3 153 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 MCFD2Q8NI22 146 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms