RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 FCGR1BQ92637 280 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 BORCS5Q969J3 196 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 MRGPRFQ96AM1 343 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF2Q9BSG1 426 aaPredicted RBP4.81□□□□□ -1.64
HDAC1-204ENST00000471488 PBDC1Q9BVG4 233 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 KRTAP1-5Q9BYS1 174 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 NRN1Q9NPD7 142 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 PLCXD1Q9NUJ7 323 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 HLA-DRB4X5D2U9 266 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
HDAC1-204ENST00000471488 MYCBP2O75592 4640 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 F6UB75 175 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 CLN5O75503 358 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 PMP2P02689 132 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 ATP5G1P05496 136 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 FGF2P09038 288 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 S100GP29377 79 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 ID1P41134 155 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 ATP5G3P48201 142 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 RFX2P48378 723 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 ERVFC1-1P60608 527 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 PSG9Q00887 426 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 DHODHQ02127 395 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 ICAM4Q14773 271 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 OXA1LQ15070 435 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 MSMO1Q15800 293 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 FAM78BQ5VT40 261 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 RNASE11Q8TAA1 199 aaKnown RBP4.8□□□□□ -1.64
HDAC1-204ENST00000471488 MGLLQ99685 303 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 FKBP14Q9NWM8 211 aa4.8□□□□□ -1.64
HDAC1-204ENST00000471488 MRPL36Q9P0J6 103 aaKnown RBP4.8□□□□□ -1.64
HDAC1-204ENST00000471488 GPR31O00270 319 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 RGS10O43665 173 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 SCGNO76038 276 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 ETV6P41212 452 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
HDAC1-204ENST00000471488 AKR1C2P52895 323 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 LINC00315P59091 139 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 HSPE1P61604 102 aaKnown RBP4.79□□□□□ -1.64
HDAC1-204ENST00000471488 MLLT11Q13015 90 aaPredicted RBP4.79□□□□□ -1.64
HDAC1-204ENST00000471488 HOGA1Q86XE5 327 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 C1orf158Q8N1D5 194 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF709Q8N972 641 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF114Q8NC26 417 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 OR5AP2Q8NGF4 316 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 PPP1R14BQ96C90 147 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 GNPNAT1Q96EK6 184 aaPredicted RBP4.79□□□□□ -1.64
HDAC1-204ENST00000471488 Q9H3A6 140 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 SAV1Q9H4B6 383 aaPredicted RBP4.79□□□□□ -1.64
HDAC1-204ENST00000471488 SCPEP1Q9HB40 452 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 PGPEP1Q9NXJ5 209 aa4.79□□□□□ -1.64
HDAC1-204ENST00000471488 TRAV30A0A087WSZ9 112 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 TRAV26-1A0A087WT03 109 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 TRAV1-2A0A0B4J238 106 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 LYRM9A8MSI8 78 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 M0R2Z0 102 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 CORTO00230 105 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 DNAH10OSP0CZ25 163 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 BTF3P20290 206 aaKnown RBP4.78□□□□□ -1.64
HDAC1-204ENST00000471488 OR10J1P30954 320 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 RND2P52198 227 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 TSPAN5P62079 268 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 MXD1Q05195 221 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 SPINK13Q1W4C9 94 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 C4orf46Q504U0 113 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 RNASE12Q5GAN4 147 aaKnown RBP4.78□□□□□ -1.64
HDAC1-204ENST00000471488 TMEM69Q5SWH9 247 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 FOXI2Q6ZQN5 318 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 TBC1D26Q86UD7 250 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 OR51G1Q8NGK1 321 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 OR5H2Q8NGV7 314 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 OR4X1Q8NH49 305 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 ACY3Q96HD9 319 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 ABHD1Q96SE0 405 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 FNDC4Q9H6D8 234 aaPredicted RBP4.78□□□□□ -1.64
HDAC1-204ENST00000471488 RHBDL2Q9NX52 303 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 PPP1R14DQ9NXH3 145 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 KLK11Q9UBX7 282 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 TPRKBQ9Y3C4 175 aa4.78□□□□□ -1.64
HDAC1-204ENST00000471488 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 TRAV12-2A0A075B6T6 113 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 NOTOA8MTQ0 251 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 EBAG9O00559 213 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 GSTZ1O43708 216 aaPredicted RBP4.77□□□□□ -1.65
HDAC1-204ENST00000471488 NXPH3O95157 252 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 INSP01308 110 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 IGKV1-17P01599 117 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 RD3LP0DJH9 198 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
HDAC1-204ENST00000471488 ALDH3B2P48448 385 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 PAX9P55771 341 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 TAS2R20P59543 309 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 IDNKQ5T6J7 187 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 BAP18Q8IXM2 172 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 PACRGLQ8N7B6 248 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 OR1S2Q8NGQ3 325 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 SEC22AQ96IW7 307 aa4.77□□□□□ -1.65
HDAC1-204ENST00000471488 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms