RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 IGHV3-21A0A0B4J1V1 117 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 C3orf85A0A1B0GTC6 90 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 FABP12A6NFH5 140 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 OR2T8A6NH00 312 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 MPTX1A8MV57 137 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 NDUFB8O95169 186 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 OR2C1O95371 312 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 CRYGCP07315 174 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 CD7P09564 240 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 SNCAP37840 140 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 BRWD1-AS2P59051 145 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 CD81P60033 236 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 RND3P61587 244 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 ERHP84090 104 aaKnown RBP4.35□□□□□ -1.71
VARS-222ENST00000470953 KLF5Q13887 457 aaPredicted RBP4.35□□□□□ -1.71
VARS-222ENST00000470953 SPINK9Q5DT21 86 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 TCTE3Q8IZS6 198 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 OR10W1Q8NGF6 305 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 OR4C16Q8NGL9 310 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 TERB2Q8NHR7 220 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 MARCH1Q8TCQ1 289 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 DYNC2LI1Q8TCX1 351 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 PINX1Q96BK5 328 aaKnown RBP4.35□□□□□ -1.71
VARS-222ENST00000470953 CCDC140Q96MF4 163 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 SCGB3A2Q96PL1 93 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 ABHD1Q96SE0 405 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 C20orf24Q9BUV8 137 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 MIXL1Q9H2W2 232 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 SAV1Q9H4B6 383 aaPredicted RBP4.35□□□□□ -1.71
VARS-222ENST00000470953 SRD5A3Q9H8P0 318 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 FAM212BQ9NTI7 297 aaPredicted RBP4.35□□□□□ -1.71
VARS-222ENST00000470953 C21orf62Q9NYP8 219 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 UFC1Q9Y3C8 167 aa4.35□□□□□ -1.71
VARS-222ENST00000470953 F11RQ9Y624 299 aaKnown RBP4.35□□□□□ -1.71
VARS-222ENST00000470953 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TEX50A0A1B0GTY4 177 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 A0A1B0GW64 132 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 C2orf70A6NJV1 201 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 E7EUB6 86 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TGOLN2O43493 480 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 GNG7O60262 68 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 YIF1AO95070 293 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 CD74P04233 296 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 CLEC3BP05452 202 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 CTSDP07339 412 aaPredicted RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 CSN3P07498 182 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 OR5AC1P0C628 307 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 ANXA3P12429 323 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 FOLR2P14207 255 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 SUB1P53999 127 aaKnown RBP eCLIP4.34□□□□□ -1.71
VARS-222ENST00000470953 DEFA1P59665 94 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 DEFA3P59666 94 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 PRCDQ00LT1 54 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 WT1-ASQ06250 92 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 SURF2Q15527 256 aaPredicted RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 SP6Q3SY56 376 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 CD300EQ496F6 205 aaPredicted RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 ZNF585BQ52M93 769 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 SPANXN2Q5MJ10 180 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TRIQKQ629K1 86 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 ZNF57Q68EA5 555 aaPredicted RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 BTNL8Q6UX41 500 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 RBPMS2Q6ZRY4 209 aaKnown RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 SLC16A13Q7RTY0 426 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TMED4Q7Z7H5 227 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 OR51S1Q8NGJ8 323 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 OR2K2Q8NGT1 345 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 VN1R17PQ8TDU5 208 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 CACNG8Q8WXS5 425 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 FRZBQ92765 325 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 BSCL2Q96G97 398 aaPredicted RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 FANCD2OSQ96PS1 177 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TP53RKQ96S44 253 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 NAA60Q9H7X0 242 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 NDUFA4L2Q9NRX3 87 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TMEM14BQ9NUH8 114 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 TECRQ9NZ01 308 aaKnown RBP4.34□□□□□ -1.71
VARS-222ENST00000470953 APLNQ9ULZ1 77 aa4.34□□□□□ -1.71
VARS-222ENST00000470953 AGRNO00468 2067 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 PIGBOS1A0A0B4J2F0 54 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 C9orf170A2RU37 121 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 CEBPZOSA8MTT3 80 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 LGALS9O00182 355 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 CORTO00230 105 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 CTDSPLO15194 276 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 ST8SIA3O43173 380 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 UPK1BO75841 260 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 OPRK1P41145 380 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 AKR1D1P51857 326 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 HSPE1P61604 102 aaKnown RBP4.33□□□□□ -1.72
VARS-222ENST00000470953 SRPXP78539 464 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 DHODHQ02127 395 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 GAGE1Q13065 139 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 ASAH1Q13510 395 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 BAK1Q16611 211 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 ANKRD55Q3KP44 614 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms