RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 RBMS2Q15434 407 aaKnown RBP8.74□□□□□ -1.01
PTPRF-211ENST00000467464 SLC24A4Q8NFF2 622 aa8.74□□□□□ -1.01
PTPRF-211ENST00000467464 OR1S2Q8NGQ3 325 aa8.74□□□□□ -1.01
PTPRF-211ENST00000467464 RNASEH2CQ8TDP1 164 aaKnown RBP8.74□□□□□ -1.01
PTPRF-211ENST00000467464 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
PTPRF-211ENST00000467464 METTL26Q96S19 204 aa8.74□□□□□ -1.01
PTPRF-211ENST00000467464 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
PTPRF-211ENST00000467464 HEYLQ9NQ87 328 aaPredicted RBP8.74□□□□□ -1.01
PTPRF-211ENST00000467464 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
PTPRF-211ENST00000467464 RSL24D1Q9UHA3 163 aaKnown RBP8.74□□□□□ -1.01
PTPRF-211ENST00000467464 TRAV30A0A087WSZ9 112 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 RPS10-NUDT3A0A1W2PQS6 291 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 CEBPZOSA8MTT3 80 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 DNASE2O00115 360 aaPredicted RBP8.73□□□□□ -1.01
PTPRF-211ENST00000467464 CA1P00915 261 aaPredicted RBP8.73□□□□□ -1.01
PTPRF-211ENST00000467464 SULT1A3P0DMM9 295 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 SULT1A4P0DMN0 295 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 SLC25A4P12235 298 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 NPY1RP25929 384 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 OR10J1P30954 320 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
PTPRF-211ENST00000467464 KLF9Q13886 244 aaPredicted RBP8.73□□□□□ -1.01
PTPRF-211ENST00000467464 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
PTPRF-211ENST00000467464 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 LYZL2Q7Z4W2 148 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
PTPRF-211ENST00000467464 GRAMD2BQ96HH9 432 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 TMEM231Q9H6L2 316 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 RABAC1Q9UI14 185 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 V9GYH0 126 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 KMT2AQ03164 3969 aa8.73□□□□□ -1.01
PTPRF-211ENST00000467464 A0A0B4J2A0 478 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 A0A1W2PS18 150 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 C4BPBP20851 252 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 STXBP6Q8NFX7 210 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 OR11H2Q8NH07 326 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 NPIPB3Q92617 1050 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 RARRES2Q99969 163 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 RBKSQ9H477 322 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 SHPKQ9UHJ6 478 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 SCP2D1Q9UJQ7 156 aa8.72□□□□□ -1.01
PTPRF-211ENST00000467464 FABP12A6NFH5 140 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 KNCNA6PVL3 124 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 ZNF688P0C7X2 276 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 CCR6P51684 374 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 RPL11P62913 178 aaKnown RBP8.71□□□□□ -1.02
PTPRF-211ENST00000467464 SMCO1Q147U7 214 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 ZNF79Q15937 498 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 TMEM217Q8N7C4 229 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 Q8NAQ8 132 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 MCFD2Q8NI22 146 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 DTD1Q8TEA8 209 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
PTPRF-211ENST00000467464 KCNIP3Q9Y2W7 256 aa8.71□□□□□ -1.02
PTPRF-211ENST00000467464 IGKV1D-37A0A075B6S9 117 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 PITX3O75364 302 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 SCGB2A1O75556 95 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 LY6G6CO95867 125 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 TOMM40O96008 361 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 HNRNPCP07910 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPRF-211ENST00000467464 AKR1C4P17516 323 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 NANOS2P60321 138 aaKnown RBP8.7□□□□□ -1.02
PTPRF-211ENST00000467464 Q8WTZ3 238 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 SCGB3A2Q96PL1 93 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 RBM38Q9H0Z9 239 aaKnown RBP8.7□□□□□ -1.02
PTPRF-211ENST00000467464 MCUBQ9NWR8 336 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 CACFD1Q9UGQ2 172 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 VPS13DQ5THJ4 4388 aa8.7□□□□□ -1.02
PTPRF-211ENST00000467464 DEFB4AO15263 64 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 BUB3O43684 328 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 IL4P05112 153 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 SRPXP78539 464 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 STHQ8IWL8 128 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 LGI3Q8N145 548 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 ACY3Q96HD9 319 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 KLK5Q9Y337 293 aaPredicted RBP8.69□□□□□ -1.02
PTPRF-211ENST00000467464 U3KQ87 197 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 X6R8D5 127 aa8.69□□□□□ -1.02
PTPRF-211ENST00000467464 FRAS1Q86XX4 4008 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 ZNF705EA8MWA4 302 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-211ENST00000467464 FAM90A26D6RGX4 464 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
PTPRF-211ENST00000467464 IFNA10P01566 189 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 RBMY1A1P0DJD3 496 aaKnown RBP8.68□□□□□ -1.02
PTPRF-211ENST00000467464 RBMY1CP0DJD4 496 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 RD3LP0DJH9 198 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 SPP1P10451 314 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 PSG1P11464 419 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 DHRS2Q13268 280 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 GAMTQ14353 236 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 RBMY1FQ15415 496 aaKnown RBP8.68□□□□□ -1.02
PTPRF-211ENST00000467464 TMEM128Q5BJH2 165 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 ETFRF1Q6IPR1 90 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 NOXA1Q86UR1 476 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 LRTM2Q8N967 370 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 RAB40CQ96S21 281 aa8.68□□□□□ -1.02
PTPRF-211ENST00000467464 DNAH10Q8IVF4 4471 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms