RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 VPS13BQ7Z7G8 4022 aa8.37□□□□□ -1.07
CNOT4-208ENST00000465721 A0A0B4J293 547 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 ZNF701M0R085 212 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-208ENST00000465721 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 S100GP29377 79 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 OPRK1P41145 380 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
CNOT4-208ENST00000465721 MLANAQ16655 118 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 BSXQ3C1V8 233 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 RNF212Q495C1 297 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 GPR141Q7Z602 305 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 LYSMD2Q8IV50 215 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 MAPKAPK5-AS1Q8N8E1 139 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
CNOT4-208ENST00000465721 DKK2Q9UBU2 259 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 RSL24D1Q9UHA3 163 aaKnown RBP8.36□□□□□ -1.07
CNOT4-208ENST00000465721 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
CNOT4-208ENST00000465721 LOC100506127A0A0U1RQW1 187 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 TMEM189A5PLL7 270 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 C16orf90A8MZG2 172 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 TMEM127O75204 238 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 HNRNPCP07910 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
CNOT4-208ENST00000465721 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 HLA-DMAP28067 261 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-208ENST00000465721 EIF2B2P49770 351 aaKnown RBP8.35□□□□□ -1.07
CNOT4-208ENST00000465721 EMP1P54849 157 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 UBE2NLQ5JXB2 153 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 TMEM69Q5SWH9 247 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 LPCAT3Q6P1A2 487 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 TMEM230Q96A57 120 aa8.35□□□□□ -1.07
CNOT4-208ENST00000465721 SEPSECSQ9HD40 501 aaKnown RBP8.35□□□□□ -1.07
CNOT4-208ENST00000465721 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 TEX48A0A1B0GUV7 120 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 SCGB2A1O75556 95 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 UCP3P55916 312 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 SNRPD3P62318 126 aaKnown RBP8.34□□□□□ -1.07
CNOT4-208ENST00000465721 USF2Q15853 346 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-208ENST00000465721 GDF5OSQ5U4N7 250 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 FAM222AQ5U5X8 452 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 S100A16Q96FQ6 103 aaKnown RBP8.34□□□□□ -1.07
CNOT4-208ENST00000465721 NIPSNAP3BQ9BS92 247 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 RFNGQ9Y644 331 aa8.34□□□□□ -1.07
CNOT4-208ENST00000465721 FAT1Q14517 4588 aa8.34□□□□□ -1.08
CNOT4-208ENST00000465721 SMIM9A6NGZ8 99 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 PRSS3P35030 304 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 ETV6P41212 452 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 AKR1C2P52895 323 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-208ENST00000465721 SUB1P53999 127 aaKnown RBP eCLIP8.33□□□□□ -1.08
CNOT4-208ENST00000465721 DEFB1P60022 68 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 RND3P61587 244 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 OXA1LQ15070 435 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 TMEM88Q6PEY1 159 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 Q8N1X5 172 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 SAMD12Q8N8I0 201 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 ZNF709Q8N972 641 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 OR1S2Q8NGQ3 325 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 GPX8Q8TED1 209 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 TP53RKQ96S44 253 aa8.33□□□□□ -1.08
CNOT4-208ENST00000465721 TRAV30A0A087WSZ9 112 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 BUB3O43684 328 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 HTN3P15516 51 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 TGFBR1P36897 503 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 NKX2-1P43699 371 aaPredicted RBP8.32□□□□□ -1.08
CNOT4-208ENST00000465721 RND2P52198 227 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 TSPAN5P62079 268 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 DHODHQ02127 395 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 PRSS54Q6PEW0 395 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 SIGLEC15Q6ZMC9 328 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 PDCD10Q9BUL8 212 aa8.32□□□□□ -1.08
CNOT4-208ENST00000465721 IGHV3OR16-12A0A075B7B8 117 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 NOL3O60936 208 aaKnown RBP8.31□□□□□ -1.08
CNOT4-208ENST00000465721 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 IL4P05112 153 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 PI3P19957 117 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 OR10J1P30954 320 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-208ENST00000465721 FXYD7P58549 80 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 YPEL3P61236 119 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-208ENST00000465721 AARDQ4LEZ3 155 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 CLVS1Q8IUQ0 354 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-208ENST00000465721 Q8WTZ3 238 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 CLUHP3Q96NS8 147 aa8.31□□□□□ -1.08
CNOT4-208ENST00000465721 SAV1Q9H4B6 383 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-208ENST00000465721 YTHDF2Q9Y5A9 579 aaKnown RBP8.31□□□□□ -1.08
CNOT4-208ENST00000465721 RPS10-NUDT3A0A1W2PQS6 291 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 M0QYG6 137 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 NXPH3O95157 252 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 RCVRNP35243 200 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 PIGPP57054 158 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 FOXI2Q6ZQN5 318 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 LHFPL1Q86WI0 220 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 CROCCP3Q8IVE0 287 aa8.3□□□□□ -1.08
CNOT4-208ENST00000465721 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms