RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 RPS10-NUDT3A0A1W2PQS6 291 aa12.35□□□□□ -0.43
HMGN1-209ENST00000463631 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
HMGN1-209ENST00000463631 MLANAQ16655 118 aa12.35□□□□□ -0.43
HMGN1-209ENST00000463631 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 SMIM9A6NGZ8 99 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 IFNA10P01566 189 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 SLC25A4P12235 298 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 PGAM2P15259 253 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 Q6ZRM9 215 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 Q8WTZ3 238 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
HMGN1-209ENST00000463631 HSPG2P98160 4391 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 M0QYG6 137 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 BUB3O43684 328 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-209ENST00000463631 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 IFNA21P01568 189 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 PI3P19957 117 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 UCP1P25874 307 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 OR10J1P30954 320 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 HTR2BP41595 481 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 RND2P52198 227 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 SPCS3P61009 180 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 USF2Q15853 346 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-209ENST00000463631 RNF212Q495C1 297 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 SOHLH1Q5JUK2 328 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 SNX29P2Q8IUI4 249 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 UBE2DNLQ8IWF7 75 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 RNASEH2CQ8TDP1 164 aaKnown RBP12.33□□□□□ -0.44
HMGN1-209ENST00000463631 RRNAD1Q96FB5 475 aaKnown RBP12.33□□□□□ -0.44
HMGN1-209ENST00000463631 KRTAP4-5Q9BYR2 181 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 NACAE9PAV3 2078 aa12.33□□□□□ -0.44
HMGN1-209ENST00000463631 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-209ENST00000463631 DHODHQ02127 395 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 C2orf83Q53S99 150 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 FAM219AQ8IW50 185 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
HMGN1-209ENST00000463631 IL4P05112 153 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 TBPP20226 339 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 OXA1LQ15070 435 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
HMGN1-209ENST00000463631 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 YIPF6Q96EC8 236 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 DKK2Q9UBU2 259 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
HMGN1-209ENST00000463631 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
HMGN1-209ENST00000463631 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
HMGN1-209ENST00000463631 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-209ENST00000463631 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-209ENST00000463631 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
HMGN1-209ENST00000463631 CDS2O95674 445 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 TOMM40O96008 361 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 ELK1P19419 428 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 NUP62P37198 522 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-209ENST00000463631 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
HMGN1-209ENST00000463631 SP6Q3SY56 376 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 SLC24A4Q8NFF2 622 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 TMEM222Q9H0R3 208 aa12.29□□□□□ -0.44
HMGN1-209ENST00000463631 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 CD3DP04234 171 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 EMP1P54849 157 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 GDF5OSQ5U4N7 250 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 ETFRF1Q6IPR1 90 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 FOXI2Q6ZQN5 318 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 ZNF709Q8N972 641 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 TMEM170AQ8WVE7 144 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 ABHD1Q96SE0 405 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 SAV1Q9H4B6 383 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-209ENST00000463631 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
HMGN1-209ENST00000463631 NXPH3O95157 252 aa12.27□□□□□ -0.45
HMGN1-209ENST00000463631 RD3LP0DJH9 198 aa12.27□□□□□ -0.45
HMGN1-209ENST00000463631 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-209ENST00000463631 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
HMGN1-209ENST00000463631 MTFP1Q9UDX5 166 aa12.27□□□□□ -0.45
HMGN1-209ENST00000463631 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 PSMB3P49720 205 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 ZNF79Q15937 498 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 SPATA31B1PQ5VZV4 182 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 LHFPL5Q8TAF8 219 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 RBPMSQ93062 196 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms